RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 MGEA5O60502 916 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 NMT2O60551 498 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 IGHA1P01876 353 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 PDHBP11177 359 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TDGF1P13385 188 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 ZSCAN20P17040 1043 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-245ENST00000556958 ATP5JP18859 108 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 CSRP1P21291 193 aaKnown RBP6.62□□□□□ -1.35
ATXN3-245ENST00000556958 METAP2P50579 478 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATXN3-245ENST00000556958 BCAR1P56945 870 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 IGBP1P78318 339 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 PPARAQ07869 468 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TMEM62Q0P6H9 643 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TROAPQ12815 778 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 PGM5Q15124 567 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 COL28A1Q2UY09 1125 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TMEM259Q4ZIN3 620 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 SH3PXD2AQ5TCZ1 1133 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TPRG1Q6ZUI0 275 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 RHPN1Q8TCX5 695 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 HDAC7Q8WUI4 952 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 SEPT1Q8WYJ6 367 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 PIK3R5Q8WYR1 880 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TTC14Q96N46 770 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 SENP7Q9BQF6 1050 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TMEM47Q9BQJ4 181 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 MKNK1Q9BUB5 465 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 NAPBQ9H115 298 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 ARRDC1-AS1Q9H2J1 176 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 CHRDQ9H2X0 955 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 SMARCAD1Q9H4L7 1026 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 MRS2Q9HD23 443 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 GINS2Q9Y248 185 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 SSX2IPQ9Y2D8 614 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 PCDHGA5Q9Y5G8 931 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 DNMT3AQ9Y6K1 912 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-245ENST00000556958 CACNA1IQ9P0X4 2223 aa6.62□□□□□ -1.35
ATXN3-245ENST00000556958 USP9XQ93008 2570 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-245ENST00000556958 TTC3P53804 2025 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 MYO18BQ8IUG5 2567 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 SMIM35A0A1B0GVV1 85 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 SPATA31C2B4DYI2 1134 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 NT5C1B-RDH14C9J2C7 533 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 GIPC1O14908 333 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 INPPL1O15357 1258 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 FIBPO43427 364 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 C1RP00736 705 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 ADH1AP07327 375 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 ZFYP08048 801 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 CNPP09543 421 aaKnown RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 NCLP19338 710 aaKnown RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 TCF7P36402 384 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 HSD17B4P51659 736 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 SP4Q02446 784 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 SLFN5Q08AF3 891 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 TRAF1Q13077 416 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 WTAPQ15007 396 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 CDC37Q16543 378 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 GET4Q7L5D6 327 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 FEZF2Q8TBJ5 459 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 APPBP2Q92624 585 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 OSBP2Q969R2 916 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 KIF1BPQ96EK5 621 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 IGSF21Q96ID5 467 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 BBC3Q96PG8 261 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 RPP25Q9BUL9 199 aaKnown RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 UBA5Q9GZZ9 404 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 ADAMTS10Q9H324 1103 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 PLEKHA4Q9H4M7 779 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 EPB41L4AQ9HCS5 686 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 MAN1C1Q9NR34 630 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 VPS45Q9NRW7 570 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 MRPL17Q9NRX2 175 aaKnown RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 CDH7Q9ULB5 785 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 EXOC6BQ9Y2D4 811 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 NOC2LQ9Y3T9 749 aaKnown RBP6.61□□□□□ -1.35
ATXN3-245ENST00000556958 SPTA1P02549 2419 aa6.61□□□□□ -1.35
ATXN3-245ENST00000556958 CAPN8A6NHC0 703 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 CHURC1-FNTBB4DL54 471 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 H0Y626 953 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 ARHGAP6O43182 974 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 GPAA1O43292 621 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 TRIM16O95361 564 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 TOP3BO95985 862 aaKnown RBP6.6□□□□□ -1.35
ATXN3-245ENST00000556958 GLUD1P00367 558 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 CHGBP05060 677 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 INSRRP14616 1297 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 FSHRP23945 695 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 MARK3P27448 753 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 FNTBP49356 437 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 GHRHRQ02643 423 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 FZD5Q13467 585 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 PARM1Q6UWI2 310 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 CACNA2D4Q7Z3S7 1137 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 SPEM1Q8N4L4 309 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 RNF169Q8NCN4 708 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 FGF14Q92915 247 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 GPKOWQ92917 476 aaPredicted RBP eCLIP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms