RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 REXO2Q9Y3B8 237 aaKnown RBP6.49□□□□□ -1.37
LINC00648-203ENST00000556923 PPP2R3BQ9Y5P8 575 aa6.49□□□□□ -1.37
LINC00648-203ENST00000556923 ENPP3O14638 875 aa6.48□□□□□ -1.37
LINC00648-203ENST00000556923 IPO13O94829 963 aaKnown RBP6.48□□□□□ -1.37
LINC00648-203ENST00000556923 DPTQ07507 201 aa6.48□□□□□ -1.37
LINC00648-203ENST00000556923 CRB2Q5IJ48 1285 aa6.48□□□□□ -1.37
LINC00648-203ENST00000556923 ST8SIA2Q92186 375 aa6.48□□□□□ -1.37
LINC00648-203ENST00000556923 CLIP3Q96DZ5 547 aa6.48□□□□□ -1.37
LINC00648-203ENST00000556923 CHFRQ96EP1 664 aa6.48□□□□□ -1.37
LINC00648-203ENST00000556923 GPRC5BQ9NZH0 403 aa6.48□□□□□ -1.37
LINC00648-203ENST00000556923 NRP1O14786 923 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 PDE8AO60658 829 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 FAM20BO75063 409 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 GNAT2P19087 354 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 GPR15P49685 360 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 MANFP55145 182 aaKnown RBP6.47□□□□□ -1.37
LINC00648-203ENST00000556923 BROXQ5VW32 411 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 FRMD7Q6ZUT3 714 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 ZNF627Q7L945 461 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 C11orf74Q86VG3 221 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 LDLRAD3Q86YD5 345 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 LYSMD2Q8IV50 215 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 MSL3Q8N5Y2 521 aaKnown RBP6.47□□□□□ -1.37
LINC00648-203ENST00000556923 LEO1Q8WVC0 666 aaPredicted RBP6.47□□□□□ -1.37
LINC00648-203ENST00000556923 ANO3Q9BYT9 981 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 IKZF4Q9H2S9 585 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 NUMBLQ9Y6R0 609 aa6.47□□□□□ -1.37
LINC00648-203ENST00000556923 GRXCR1A8MXD5 290 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 GOLGA6L6A8MZA4 724 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 HOXA3O43365 443 aaPredicted RBP6.46□□□□□ -1.38
LINC00648-203ENST00000556923 KDM1AO60341 852 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 RPS6KA4O75676 772 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 CLEC2LP0C7M8 214 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 MYCLP1P12525 358 aaPredicted RBP6.46□□□□□ -1.38
LINC00648-203ENST00000556923 CASRP41180 1078 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 PPARAQ07869 468 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 DDB1Q16531 1140 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 CCDC178Q5BJE1 867 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 RABL3Q5HYI8 236 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 NAIF1Q69YI7 327 aaPredicted RBP6.46□□□□□ -1.38
LINC00648-203ENST00000556923 TAS1R1Q7RTX1 841 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 APBB1IPQ7Z5R6 666 aaPredicted RBP6.46□□□□□ -1.38
LINC00648-203ENST00000556923 SLC41A1Q8IVJ1 513 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 SLC5A5Q92911 643 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 PRDM12Q9H4Q4 367 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 TRPS1Q9UHF7 1281 aa6.46□□□□□ -1.38
LINC00648-203ENST00000556923 A0A1W2PR48 441 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 NRP2O60462 931 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 HK1P19367 917 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 XPAP23025 273 aaPredicted RBP6.45□□□□□ -1.38
LINC00648-203ENST00000556923 MGAT5Q09328 741 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 TRIM25Q14258 630 aaKnown RBP6.45□□□□□ -1.38
LINC00648-203ENST00000556923 DCAF17Q5H9S7 520 aaPredicted RBP6.45□□□□□ -1.38
LINC00648-203ENST00000556923 LMBR1LQ6UX01 489 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 OR5M3Q8NGP4 307 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 EVLQ9UI08 416 aaPredicted RBP6.45□□□□□ -1.38
LINC00648-203ENST00000556923 PRSS50Q9UI38 385 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 MAPRE3Q9UPY8 281 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 TBX22Q9Y458 520 aa6.45□□□□□ -1.38
LINC00648-203ENST00000556923 WDR33Q9C0J8 1336 aaKnown RBP6.45□□□□□ -1.38
LINC00648-203ENST00000556923 BPIP17213 487 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 INHBCP55103 352 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 NRG3P56975 720 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 PLEKHG4Q58EX7 1191 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 CCDC62Q6P9F0 684 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 Q6ZPA2 131 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 CEP89Q96ST8 783 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 CPPED1Q9BRF8 314 aaPredicted RBP6.44□□□□□ -1.38
LINC00648-203ENST00000556923 CPEB1Q9BZB8 566 aaKnown RBP6.44□□□□□ -1.38
LINC00648-203ENST00000556923 WNT8AQ9H1J5 351 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 NRDE2Q9H7Z3 1164 aa6.44□□□□□ -1.38
LINC00648-203ENST00000556923 OVOL3O00110 214 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 RAB11FIP3O75154 756 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 KRT4P19013 534 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 NR4A1P22736 598 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 DUSP2Q05923 314 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 MRPL49Q13405 166 aaKnown RBP6.43□□□□□ -1.38
LINC00648-203ENST00000556923 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 PITRM1Q5JRX3 1037 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 RASSF3Q86WH2 238 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 GLB1L2Q8IW92 636 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 SLC25A43Q8WUT9 341 aaPredicted RBP6.43□□□□□ -1.38
LINC00648-203ENST00000556923 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 LSM14BQ9BX40 385 aaKnown RBP6.43□□□□□ -1.38
LINC00648-203ENST00000556923 EPC1Q9H2F5 836 aa6.43□□□□□ -1.38
LINC00648-203ENST00000556923 A0A087X1B8 175 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 GZMKP49863 264 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 PTTG1IPP53801 180 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 GYS2P54840 703 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 WNT3AP56704 352 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 PDCD1Q15116 288 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 UBE3CQ15386 1083 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 DHCR24Q15392 516 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 MRGPREQ86SM8 312 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 RNF180Q86T96 592 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 NOP9Q86U38 636 aaKnown RBP6.42□□□□□ -1.38
LINC00648-203ENST00000556923 ULK2Q8IYT8 1036 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 ZNF276Q8N554 614 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 OR52N2Q8NGI0 321 aa6.42□□□□□ -1.38
LINC00648-203ENST00000556923 OR14C36Q8NHC7 312 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms