RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 LMCD1Q9NZU5 365 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 DNM3Q9UQ16 869 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 HES2Q9Y543 173 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 MYO7AQ13402 2215 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 CNTNAP2Q9UHC6 1331 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 NPHP3-ACAD11A0A0J9YXS1 232 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 B4GALT3O60512 393 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 NPTXRO95502 500 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 EOMESO95936 686 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 BMP15O95972 392 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 PLA2G4BP0C869 781 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 LAG3P18627 525 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 PLCG1P19174 1290 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 NAMPTP43490 491 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 MAPK7Q13164 816 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 PKP1Q13835 747 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 FOXD4L6Q3SYB3 417 aaPredicted RBP11.47□□□□□ -0.57
SNX6-208ENST00000556712 TIGD5Q53EQ6 642 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 RINT1Q6NUQ1 792 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 FOXD4L3Q6VB84 417 aaPredicted RBP11.47□□□□□ -0.57
SNX6-208ENST00000556712 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 USP49Q70CQ1 688 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 THNSL1Q8IYQ7 743 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 DEPTORQ8TB45 409 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 SPPL3Q8TCT6 385 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 AK8Q96MA6 479 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 CLIC6Q96NY7 704 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 CCDC113Q9H0I3 377 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 NXF3Q9H4D5 531 aaKnown RBP11.47□□□□□ -0.57
SNX6-208ENST00000556712 RSAD1Q9HA92 442 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 TBC1D13Q9NVG8 400 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 PRMT7Q9NVM4 692 aaPredicted RBP11.47□□□□□ -0.57
SNX6-208ENST00000556712 FBXO2Q9UK22 296 aaPredicted RBP11.47□□□□□ -0.57
SNX6-208ENST00000556712 IPPQ9Y573 584 aa11.47□□□□□ -0.57
SNX6-208ENST00000556712 TCF20Q9UGU0 1960 aaKnown RBP11.47□□□□□ -0.57
SNX6-208ENST00000556712 NT5C1B-RDH14C9J2C7 533 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNX6-208ENST00000556712 OFD1O75665 1012 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 FGF18O76093 207 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 PRKCBP05771 671 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 SKIP12755 728 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 AXLP30530 894 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNX6-208ENST00000556712 LONP1P36776 959 aaKnown RBP11.46□□□□□ -0.57
SNX6-208ENST00000556712 MLH1P40692 756 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 UBA7P41226 1012 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 KCNQ1P51787 676 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 SLC12A3P55017 1021 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 PEX3P56589 373 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 DHX8Q14562 1220 aaKnown RBP11.46□□□□□ -0.57
SNX6-208ENST00000556712 NOMO2Q5JPE7 1267 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 KCNT2Q6UVM3 1135 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 GLB1LQ6UWU2 654 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 C1orf186Q6ZWK4 172 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 MRPL10Q7Z7H8 261 aaKnown RBP11.46□□□□□ -0.57
SNX6-208ENST00000556712 ADGRD2Q7Z7M1 963 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 TMEM173Q86WV6 379 aaPredicted RBP11.46□□□□□ -0.57
SNX6-208ENST00000556712 RASSF8Q8NHQ8 419 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 KIFAP3Q92845 792 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 PGBD4Q96DM1 585 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 IFT74Q96LB3 600 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 MRPL9Q9BYD2 267 aaKnown RBP11.46□□□□□ -0.57
SNX6-208ENST00000556712 NT5C3AQ9H0P0 336 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 GBP3Q9H0R5 595 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 LMAN2LQ9H0V9 348 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 C2orf40Q9H1Z8 148 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 ZSCAN16Q9H4T2 348 aaPredicted RBP11.46□□□□□ -0.57
SNX6-208ENST00000556712 PDZD7Q9H5P4 517 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 NSUN3Q9H649 340 aaKnown RBP11.46□□□□□ -0.57
SNX6-208ENST00000556712 AAASQ9NRG9 546 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 PCDHB12Q9Y5F1 795 aa11.46□□□□□ -0.57
SNX6-208ENST00000556712 PHLPP2Q6ZVD8 1323 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 BRWD1Q9NSI6 2320 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 CCDC169A6NNP5 214 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 SFI1A8K8P3 1242 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 ZNF623O75123 536 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 POMCP01189 267 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 ITGA4P13612 1032 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 NCLP19338 710 aaKnown RBP11.45□□□□□ -0.58
SNX6-208ENST00000556712 AKAP5P24588 427 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 NPTX2P47972 431 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 BCAR1P56945 870 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 NCBP1Q09161 790 aaKnown RBP11.45□□□□□ -0.58
SNX6-208ENST00000556712 HYAL1Q12794 435 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 DMP1Q13316 513 aaPredicted RBP11.45□□□□□ -0.58
SNX6-208ENST00000556712 PRPF4BQ13523 1007 aaKnown RBP11.45□□□□□ -0.58
SNX6-208ENST00000556712 MCM6Q14566 821 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 PPP2R5AQ15172 486 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 PCBP1Q15365 356 aaKnown RBP eCLIP11.45□□□□□ -0.582e-8■■■■■ 73.5
SNX6-208ENST00000556712 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 NAALADL2Q58DX5 795 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 EEF1DP3Q658K8 133 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 SLC27A1Q6PCB7 646 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 EP400NLQ6ZTU2 488 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 ZNF280BQ86YH2 543 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 SLC39A11Q8N1S5 342 aa11.45□□□□□ -0.58
SNX6-208ENST00000556712 SYT2Q8N9I0 419 aaPredicted RBP11.45□□□□□ -0.58
SNX6-208ENST00000556712 BCL7CQ8WUZ0 217 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms