RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 GRIN2CQ14957 1233 aa27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 CMTR2Q8IYT2 770 aaKnown RBP27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 SPIRE2Q8WWL2 714 aa27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 CPB2Q96IY4 423 aa27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 NTPCRQ9BSD7 190 aaKnown RBP27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 KMT5AQ9NQR1 393 aa27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 ARHGAP28Q9P2N2 729 aa27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 CDH23Q9H251 3354 aa27.11■■□□□ 1.93
SDR39U1-221ENST00000556707 B4GALT5O43286 388 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 PRKCBP05771 671 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 KRT18P05783 430 aaKnown RBP27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 GATMP50440 423 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 BTG3Q14201 252 aaPredicted RBP27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 UBXN11Q5T124 520 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 SPRED2Q7Z698 418 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 FIBCD1Q8N539 461 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 GUCD1Q96NT3 240 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 TGS1Q96RS0 853 aaKnown RBP27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 FAM13BQ9NYF5 915 aa27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 LARSQ9P2J5 1176 aaKnown RBP27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 RBM19Q9Y4C8 960 aaKnown RBP27.1■■□□□ 1.93
SDR39U1-221ENST00000556707 ACKR2O00590 384 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 HOXA2O43364 376 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 FAM13AO94988 1023 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 FGFR1P11362 822 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 ZNF131P52739 623 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 ERVK-21P61565 698 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 E2F4Q16254 413 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 ADALQ6DHV7 355 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 RNF169Q8NCN4 708 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 TMEM134Q9H6X4 195 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 RNF19AQ9NV58 838 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 PCDHB2Q9Y5E7 798 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 CNTNAP2Q9UHC6 1331 aa27.09■■□□□ 1.93
SDR39U1-221ENST00000556707 K7ERI5 159 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 SLC16A4O15374 487 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 LIG1P18858 919 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 SMTNP53814 917 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 PRPF4BQ13523 1007 aaKnown RBP27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 IQUBQ8NA54 791 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 CUEDC2Q9H467 287 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 CERS4Q9HA82 394 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 PARVGQ9HBI0 331 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 PHLPP2Q6ZVD8 1323 aa27.08■■□□□ 1.93
SDR39U1-221ENST00000556707 A0A1B0GUA9 196 aa27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 MYMKA6NI61 221 aa27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 TBKBP1A7MCY6 615 aa27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 PAN2Q504Q3 1202 aaKnown RBP27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 MRPL10Q7Z7H8 261 aaKnown RBP27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 DDX12PQ92771 950 aa27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 DHX58Q96C10 678 aa27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 CDX2Q99626 313 aaPredicted RBP27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 TMEM117Q9H0C3 514 aa27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 PRDM12Q9H4Q4 367 aa27.07■■□□□ 1.92
SDR39U1-221ENST00000556707 TTLL13PA6NNM8 815 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 POLR2DO15514 142 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 TBCAO75347 108 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 EDN1P05305 212 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 CMA1P23946 247 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 SLC27A1Q6PCB7 646 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 DYMQ7RTS9 669 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 TAS1R3Q7RTX0 852 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 MYCT1Q8N699 235 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 TMEM161BQ8NDZ6 487 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 CNNM3Q8NE01 707 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 ARNTL2Q8WYA1 636 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 CLP1Q92989 425 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 PGBD4Q96DM1 585 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 SAMD11Q96NU1 681 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 C17orf80Q9BSJ5 609 aa27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 EIF2AQ9BY44 585 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-221ENST00000556707 PRRC2BQ5JSZ5 2229 aaKnown RBP27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 LINC00271P0C7V0 271 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 CLLU1OSQ5K130 101 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 CDR2LQ86X02 465 aaPredicted RBP27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 ABI1Q8IZP0 508 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 LPPQ93052 612 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 DNAJC19Q96DA6 116 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 CASD1Q96PB1 797 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 TNMDQ9H2S6 317 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 GDPD2Q9HCC8 539 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 KBTBD4Q9NVX7 518 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 MTUS1Q9ULD2 1270 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 KCNH3Q9ULD8 1083 aa27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 MRPL42Q9Y6G3 142 aaKnown RBP27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 COL4A4P53420 1690 aaPredicted RBP27.05■■□□□ 1.92
SDR39U1-221ENST00000556707 EPOPA6NHQ4 379 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 H0YCG3 227 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 N4BP3O15049 544 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 NCKAP1LP55160 1127 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 TMEM132AQ24JP5 1023 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 NT5DC1Q5TFE4 455 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 TMEM192Q8IY95 271 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 SMG8Q8ND04 991 aaKnown RBP27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 MYLIPQ8WY64 445 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 PYM1Q9BRP8 204 aaKnown RBP27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 TRIM6Q9C030 488 aaPredicted RBP27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 ZHX3Q9H4I2 956 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 PDZD7Q9H5P4 517 aa27.04■■□□□ 1.92
SDR39U1-221ENST00000556707 USP20Q9Y2K6 914 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms