RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 ITGA4P13612 1032 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 ST3GAL1Q11201 340 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 TMEM132AQ24JP5 1023 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 ANKRD54Q6NXT1 300 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 MRPL43Q8N983 215 aaKnown RBP11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 VN1R2Q8NFZ6 395 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 ERMNQ8TAM6 284 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 AUTS2Q8WXX7 1259 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 RSPH1Q8WYR4 309 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 CASP10Q92851 521 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 HSD17B14Q9BPX1 270 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 PHF7Q9BWX1 381 aaPredicted RBP11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 TMEM60Q9H2L4 133 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 C11orf16Q9NQ32 467 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 ANKEF1Q9NU02 776 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 KANSL3Q9P2N6 904 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 DNAJB4Q9UDY4 337 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 C2orf71A6NGG8 1288 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 LRRIQ4A6NIV6 560 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 ALDH2P05091 517 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 GALTP07902 379 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 OR52Z1P0C646 297 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 AXLP30530 894 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 SLC11A1P49279 550 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 RARRES1P49788 294 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 PTENP60484 403 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 HMGN5P82970 282 aaKnown RBP11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 CAPSQ13938 189 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 CBX2Q14781 532 aaPredicted RBP11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 CES5AQ6NT32 575 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 AGMOQ6ZNB7 445 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 ZNF280BQ86YH2 543 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 CNNM3Q8NE01 707 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 ASAP3Q8TDY4 903 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 IGSF21Q96ID5 467 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 POLR3FQ9H1D9 316 aaPredicted RBP11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 UBN1Q9NPG3 1134 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 XPNPEP1Q9NQW7 623 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 NOL7Q9UMY1 257 aaKnown RBP11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 FAN1Q9Y2M0 1017 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 HCFC2Q9Y5Z7 792 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 CNTNAP2Q9UHC6 1331 aa11.75□□□□□ -0.53
SPTLC2-205ENST00000556607 TSPAN1O60635 241 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 CLASP2O75122 1294 aaKnown RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 DDHD2O94830 711 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 LYPLA2O95372 231 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 LIG1P18858 919 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 HOXA11P31270 313 aaPredicted RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 OR1G1P47890 313 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 GIT2Q14161 759 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 TTC38Q5R3I4 469 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 UBXN11Q5T124 520 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 DDX53Q86TM3 631 aaKnown RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 TMEM173Q86WV6 379 aaPredicted RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 CATSPER3Q86XQ3 398 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 HACE1Q8IYU2 909 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 EIF2AQ9BY44 585 aaKnown RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 ZBP1Q9H171 429 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 CSRNP2Q9H175 543 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 FOXP1Q9H334 677 aaPredicted RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 TUFT1Q9NNX1 390 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 HES2Q9Y543 173 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 IPPQ9Y573 584 aa11.74□□□□□ -0.53
SPTLC2-205ENST00000556607 ARHGEF35A5YM69 484 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 LOC730098B7Z3J9 87 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 C2CD2LO14523 706 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 NRP1O14786 923 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 MED24O75448 989 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 NR1I2O75469 434 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 NPTXRO95502 500 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 CTSAP10619 480 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 HOXB8P17481 243 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 GLRA2P23416 452 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 KLRC2P26717 231 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 ARL2P36404 184 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 MLH1P40692 756 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 RBM25P49756 843 aaKnown RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 AFF1P51825 1210 aaKnown RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 HERC4Q5GLZ8 1057 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 RARS2Q5T160 578 aaKnown RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 SYCE2Q6PIF2 218 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 TMEM184AQ6ZMB5 413 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 MRPL10Q7Z7H8 261 aaKnown RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 CDR2LQ86X02 465 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 SMG8Q8ND04 991 aaKnown RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 NACC1Q96RE7 527 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms