RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 MMEP08473 750 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 UCHL3P15374 230 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 GNA11P29992 359 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 CLK2P49760 499 aaKnown RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 BLMHQ13867 455 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 SF3B3Q15393 1217 aaKnown RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 CNGA2Q16280 664 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 PPP2R5EQ16537 467 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 CCDC92Q53HC0 331 aaPredicted RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 NUGGCQ68CJ6 796 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 EPM2AIP1Q7L775 607 aaPredicted RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 HEATR3Q7Z4Q2 680 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 ANKRD23Q86SG2 305 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 LCA5Q86VQ0 697 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 CNBD1Q8NA66 436 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 CEP70Q8NHQ1 597 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 FMO2Q99518 471 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 TMEM47Q9BQJ4 181 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 CENPOQ9BU64 300 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 FOCADQ5VW36 1801 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 SMCO2A6NFE2 343 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 hCG_1984214I3L0E3 225 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 DDX3XO00571 662 aaKnown RBP eCLIP9.2□□□□□ -0.94
MARK3-210ENST00000556463 UBTFL6P0CB48 400 aaPredicted RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 PON1P27169 355 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 HADHBP55084 474 aaKnown RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 DSG2Q14126 1118 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 LRRC41Q15345 812 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 EPHA7Q15375 998 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 ALKBH5Q6P6C2 394 aaKnown RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 FRMD5Q7Z6J6 570 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 TRIM50Q86XT4 487 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 SYCE1Q8N0S2 351 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 ZNF713Q8N859 430 aaPredicted RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 ANKLE1Q8NAG6 615 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 HAS1Q92839 578 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 DDX50Q9BQ39 737 aaKnown RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 RIOX1Q9H6W3 641 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 ABCF3Q9NUQ8 709 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 UTP11Q9Y3A2 253 aaKnown RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 FESP07332 822 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 GBP1P32455 592 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 HOXD13P35453 343 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 SKIV2L2P42285 1042 aaKnown RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 MAGEA8P43361 318 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 KCNH2Q12809 1159 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 RAPGEF1Q13905 1077 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
MARK3-210ENST00000556463 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 ISLR2Q6UXK2 745 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 DYMQ7RTS9 669 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 ERLEC1Q96DZ1 483 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 BRD8Q9H0E9 1235 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 CARD9Q9H257 536 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 C6orf50Q9HD87 102 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 LIMD1Q9UGP4 676 aa9.2□□□□□ -0.94
MARK3-210ENST00000556463 AJAP1Q9UKB5 411 aaPredicted RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 COL5A3P25940 1745 aaPredicted RBP9.2□□□□□ -0.94
MARK3-210ENST00000556463 TP73O15350 636 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 ALDH3A1P30838 453 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 GJA8P48165 433 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 PMS2P54278 862 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 IFI35P80217 286 aaPredicted RBP9.19□□□□□ -0.94
MARK3-210ENST00000556463 COG7P83436 770 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 DHX34Q14147 1143 aaKnown RBP9.19□□□□□ -0.94
MARK3-210ENST00000556463 RCN2Q14257 317 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 CROCCP2Q86T23 111 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 RAB17Q9H0T7 212 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 ECT2Q9H8V3 914 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 PCYOX1Q9UHG3 505 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 GTPBP10A4D1E9 387 aaKnown RBP9.19□□□□□ -0.94
MARK3-210ENST00000556463 CCDC169A6NNP5 214 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 SPDYE16A6NNV3 312 aaPredicted RBP9.19□□□□□ -0.94
MARK3-210ENST00000556463 O00370 1275 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 ZSCAN9O15535 394 aaPredicted RBP9.19□□□□□ -0.94
MARK3-210ENST00000556463 GNAZP19086 355 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 ALDH5A1P51649 535 aaPredicted RBP9.19□□□□□ -0.94
MARK3-210ENST00000556463 CALCRLQ16602 461 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 UBAP2Q5T6F2 1119 aaKnown RBP9.19□□□□□ -0.94
MARK3-210ENST00000556463 RFX8Q6ZV50 586 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 C14orf80Q86SX3 495 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 VSIG1Q86XK7 387 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 OPTNQ96CV9 577 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 ERVK-5Q9HDB9 667 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 MINPP1Q9UNW1 487 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 TRIM33Q9UPN9 1127 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 LRRC42Q9Y546 428 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 USP17L3A6NCW0 530 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 USP17L4A6NCW7 530 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 TRAF5O00463 557 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 OPHN1O60890 802 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 IMPDH2P12268 514 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 VCAM1P19320 739 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 CTNNA2P26232 953 aa9.19□□□□□ -0.94
MARK3-210ENST00000556463 MSH2P43246 934 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms