RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ABI1Q8IZP0 508 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 P2RX5Q93086 422 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 MRPL38Q96DV4 380 aaKnown RBP12.78□□□□□ -0.36
SLIRP-205ENST00000556310 CCDC51Q96ER9 411 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 NT5C3AQ9H0P0 336 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 LMAN2LQ9H0V9 348 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-205ENST00000556310 FAM105AQ9NUU6 356 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 CUL9Q8IWT3 2517 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 E9PMD0 336 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 ZNF623O75123 536 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
SLIRP-205ENST00000556310 HOXA11P31270 313 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-205ENST00000556310 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.37
SLIRP-205ENST00000556310 NAMPTP43490 491 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 PPP2R5AQ15172 486 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 AMHR2Q16671 573 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 TMEM119Q4V9L6 283 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 TIGD5Q53EQ6 642 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 NAALADL2Q58DX5 795 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 CLLU1OSQ5K130 101 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 NOTUMQ6P988 496 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 ZBTB8OSQ8IWT0 167 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 KIFAP3Q92845 792 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
SLIRP-205ENST00000556310 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 AAASQ9NRG9 546 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 THEGQ9P2T0 379 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.37
SLIRP-205ENST00000556310 MYO7AQ13402 2215 aa12.77□□□□□ -0.37
SLIRP-205ENST00000556310 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
SLIRP-205ENST00000556310 LAG3P18627 525 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
SLIRP-205ENST00000556310 PTPAQ15257 358 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 ZRSR1Q15695 479 aaKnown RBP12.76□□□□□ -0.37
SLIRP-205ENST00000556310 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 UBXN11Q5T124 520 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 SPOUT1Q5T280 376 aaKnown RBP12.76□□□□□ -0.37
SLIRP-205ENST00000556310 CABP7Q86V35 215 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 HELQQ8TDG4 1101 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 PGBD4Q96DM1 585 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 IFT74Q96LB3 600 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 PRIMPOLQ96LW4 560 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 CWH43Q9H720 699 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
SLIRP-205ENST00000556310 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-205ENST00000556310 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 PCDHB2Q9Y5E7 798 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
SLIRP-205ENST00000556310 MORC2Q9Y6X9 1032 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-205ENST00000556310 TDRD15B5MCY1 1934 aaKnown RBP12.75□□□□□ -0.37
SLIRP-205ENST00000556310 GRM6O15303 877 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 ARF4P18085 180 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-205ENST00000556310 UBA7P41226 1012 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 GRIN1Q05586 938 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 TPRNQ4KMQ1 711 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 GLB1LQ6UWU2 654 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 MRPL10Q7Z7H8 261 aaKnown RBP12.75□□□□□ -0.37
SLIRP-205ENST00000556310 KLHL23Q8NBE8 558 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 COLGALT1Q8NBJ5 622 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 DEPTORQ8TB45 409 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 LPPQ93052 612 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 CALML4Q96GE6 196 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 RUSC1Q9BVN2 902 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 TIPINQ9BVW5 301 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 PRDM6Q9NQX0 595 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 CNTNAP2Q9UHC6 1331 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 PCDHB12Q9Y5F1 795 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
SLIRP-205ENST00000556310 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 B4GALT5O43286 388 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 HIP1RO75146 1068 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 ITGB1P05556 798 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SLIRP-205ENST00000556310 GUCY2CP25092 1073 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 PPM1AP35813 382 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 MAPK7Q13164 816 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 SKIV2LQ15477 1246 aaKnown RBP12.74□□□□□ -0.37
SLIRP-205ENST00000556310 MAPK6Q16659 721 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 LRRC55Q6ZSA7 311 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 C1orf186Q6ZWK4 172 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 DAW1Q8N136 415 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms