RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SNX2O60749 519 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 CLASP2O75122 1294 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 NCALDP61601 193 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ERVK-9P63128 1117 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 TNIP1Q15025 636 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 C2CD5Q86YS7 1000 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 CMTR1Q8N1G2 835 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 TEX9Q8N6V9 391 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 SCG3Q8WXD2 468 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 KLHL29Q96CT2 875 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 MTMR8Q96EF0 704 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 FAM129AQ9BZQ8 928 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 NDEL1Q9GZM8 345 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ZHX3Q9H4I2 956 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ECT2Q9H8V3 914 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 LRRC4CQ9HCJ2 640 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 SAMD15Q9P1V8 674 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ASAP1Q9ULH1 1129 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 PDS5AQ29RF7 1337 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 WDR90Q96KV7 1748 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 RASA4O43374 803 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 SRGNP10124 158 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 HSPA6P17066 643 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 PCK1P35558 622 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 ADAM9Q13443 819 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 ITIH4Q14624 930 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 IFI16Q16666 785 aaKnown RBP11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 WDR45BQ5MNZ6 344 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 AGBL2Q5U5Z8 902 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 DGLUCYQ7Z3D6 616 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 WDR60Q8WVS4 1066 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 CLMNQ96JQ2 1002 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 ZNF317Q96PQ6 595 aaPredicted RBP11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 SYT15Q9BQS2 421 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 ADAM22Q9P0K1 906 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 ARHGAP20Q9P2F6 1191 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 USP21Q9UK80 565 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 TRIM75PA6NK02 468 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 HNRNPRO43390 633 aaKnown RBP11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 RARAP10276 462 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 SKIP12755 728 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 MAGEA1P43355 309 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 PDXDC1Q6P996 788 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 PIGWQ7Z7B1 504 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 LRRC34Q8IZ02 419 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 MRRFQ96E11 262 aaKnown RBP11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 CGREF1Q99674 301 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 PUS7LQ9H0K6 701 aaKnown RBP11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 DMAP1Q9NPF5 467 aaPredicted RBP11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 CIDEBQ9UHD4 219 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 CHMP2BQ9UQN3 213 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 PCDHB13Q9Y5F0 798 aa11.09□□□□□ -0.63
EFCAB11-208ENST00000555872 WDR19Q8NEZ3 1342 aa11.08□□□□□ -0.63
EFCAB11-208ENST00000555872 LRRC72A6NJI9 287 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ABLIM1O14639 778 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 CHN1P15882 459 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 PRKACBP22694 351 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 EEF1GP26641 437 aaKnown RBP11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ECHS1P30084 290 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 EIF4A3P38919 411 aaKnown RBP11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ATP11AP98196 1134 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 GRAMD4Q6IC98 578 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 TBC1D10CQ8IV04 446 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ARL6IP6Q8N6S5 226 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 PAF1Q8N7H5 531 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 WASF1Q92558 559 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 CCDC127Q96BQ5 260 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ERP44Q9BS26 406 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 TUBGCP2Q9BSJ2 902 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 MTMR12Q9C0I1 747 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ISCUQ9H1K1 167 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 NHSQ6T4R5 1651 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ASAP2O43150 1006 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 ACSL4O60488 711 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 FTCDO95954 541 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 MSH2P43246 934 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 LACTBP83111 547 aaPredicted RBP11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 CCDC153Q494R4 210 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 TMEM67Q5HYA8 995 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 RNF220Q5VTB9 566 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 CCDC110Q8TBZ0 833 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 NOX5Q96PH1 765 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 SELENOSQ9BQE4 189 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 MTFR1LQ9H019 292 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 NEUROG2Q9H2A3 272 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 FANCFQ9NPI8 374 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 CD2APQ9Y5K6 639 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 SHBGP04278 402 aa11.08□□□□□ -0.64
EFCAB11-208ENST00000555872 RPN1P04843 607 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms