RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 CARNS1A5YM72 827 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 ALDH2P05091 517 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 SP9P0CG40 484 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 CPA1P15085 419 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 SFNP31947 248 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 DNM2P50570 870 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 XKR3Q5GH77 459 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 ZNF410Q86VK4 478 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 PHKBQ93100 1093 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 RSAD1Q9HA92 442 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 IFT122Q9HBG6 1241 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 AGPAT5Q9NUQ2 364 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 EPS15L1Q9UBC2 864 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 PRG3Q9Y2Y8 225 aaPredicted RBP21.31■■□□□ 1
SUPT16H-203ENST00000555752 COL4A3Q01955 1670 aa21.31■■□□□ 1
SUPT16H-203ENST00000555752 OTOGLQ3ZCN5 2332 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 POTEMA6NI47 508 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 F8W810 466 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 PSMD10O75832 226 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 SOD2P04179 222 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 URODP06132 367 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 SRFP11831 508 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 CDC42EP1Q00587 391 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 UBXN11Q5T124 520 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 PLA2G4FQ68DD2 849 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 MIER3Q7Z3K6 550 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 SMG7Q92540 1137 aaKnown RBP21.3■■□□□ 1
SUPT16H-203ENST00000555752 ZNF707Q96C28 371 aaPredicted RBP21.3■■□□□ 1
SUPT16H-203ENST00000555752 PGBD4Q96DM1 585 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 FAM193BQ96PV7 902 aaPredicted RBP21.3■■□□□ 1
SUPT16H-203ENST00000555752 RPS6KC1Q96S38 1066 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 HERC2P3Q9BVR0 1158 aa21.3■■□□□ 1
SUPT16H-203ENST00000555752 INO80BQ9C086 356 aaPredicted RBP21.3■■□□□ 1
SUPT16H-203ENST00000555752 FANCMQ8IYD8 2048 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 DDX11L8A8MPP1 907 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 LRRN2O75325 713 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 MAFO75444 373 aaPredicted RBP21.29■■□□□ 1
SUPT16H-203ENST00000555752 GLULP15104 373 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 GNA11P29992 359 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 RNF20Q5VTR2 975 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 MRPL10Q7Z7H8 261 aaKnown RBP21.29■■□□□ 1
SUPT16H-203ENST00000555752 CCDC12Q8WUD4 166 aaPredicted RBP21.29■■□□□ 1
SUPT16H-203ENST00000555752 TMEM175Q9BSA9 504 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 FOXQ1Q9C009 403 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 MINDY3Q9H8M7 445 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 SIT1Q9Y3P8 196 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 NCOR2Q9Y618 2525 aa21.29■■□□□ 1
SUPT16H-203ENST00000555752 GLUD1P00367 558 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 ADH1AP07327 375 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 PUM1Q14671 1186 aaKnown RBP eCLIP21.28■■□□□ 1
SUPT16H-203ENST00000555752 NONOQ15233 471 aaKnown RBP eCLIP21.28■■□□□ 1
SUPT16H-203ENST00000555752 KIAA0319Q5VV43 1072 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 ANO5Q75V66 913 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 ZNF579Q8NAF0 562 aaKnown RBP21.28■■□□□ 1
SUPT16H-203ENST00000555752 STAMQ92783 540 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 B3GALT6Q96L58 329 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 ARHGEF3Q9NR81 526 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 VPS54Q9P1Q0 977 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 CEP250Q9BV73 2442 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 CACNA1IQ9P0X4 2223 aa21.28■■□□□ 1
SUPT16H-203ENST00000555752 PRPF3O43395 683 aaKnown RBP21.27■■□□□ 1
SUPT16H-203ENST00000555752 TDP2O95551 362 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 EFEMP2O95967 443 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 HOXA11P31270 313 aaPredicted RBP21.27■■□□□ 1
SUPT16H-203ENST00000555752 OR1G1P47890 313 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 RCAN1P53805 252 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 B3GNT9Q6UX72 402 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 GET4Q7L5D6 327 aaPredicted RBP21.27■■□□□ 1
SUPT16H-203ENST00000555752 PALB2Q86YC2 1186 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 C1orf210Q8IVY1 113 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 COLGALT2Q8IYK4 626 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 RUBCNQ92622 972 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
SUPT16H-203ENST00000555752 RPP25Q9BUL9 199 aaKnown RBP21.27■■□□□ 1
SUPT16H-203ENST00000555752 STK39Q9UEW8 545 aa21.27■■□□□ 1
SUPT16H-203ENST00000555752 LAMP2P13473 410 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 GLUD2P49448 558 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 USP11P51784 963 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 NPEPPSP55786 919 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 PHLDB3Q6NSJ2 640 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 GLYCTKQ8IVS8 523 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 RNF168Q8IYW5 571 aaPredicted RBP21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 MAML2Q8IZL2 1156 aaPredicted RBP21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 SMG8Q8ND04 991 aaKnown RBP21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 RDM1Q8NG50 284 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 RHOBTB2Q9BYZ6 727 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 RXFP1Q9HBX9 757 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 BMP2KQ9NSY1 1161 aaPredicted RBP21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 DLL3Q9NYJ7 618 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 KANSL3Q9P2N6 904 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 COL4A3BPQ9Y5P4 624 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 NUMBLQ9Y6R0 609 aa21.26■□□□□ 0.99
SUPT16H-203ENST00000555752 CCDC196A0A1B0GTZ2 297 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 ANHXE9PGG2 379 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 KRT37O76014 449 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 SRGAP2CP0DJJ0 459 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 HTR4Q13639 388 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 DCLRE1AQ6PJP8 1040 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 ZC3H14Q6PJT7 736 aaKnown RBP21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 SUMF1Q8NBK3 374 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms