RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 FGFR1OPO95684 399 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 MPOP05164 745 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 PDGFRBP09619 1106 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 HSPA1AP0DMV8 641 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 HSPA1BP0DMV9 641 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 HSPA8P11142 646 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 GNAT1P11488 350 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SYT1P21579 422 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SDHBP21912 280 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 S100A1P23297 94 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 ALDH3A1P30838 453 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 CLCN2P51788 898 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 ERVFRD-1P60508 538 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 GNAI1P63096 354 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 RACK1P63244 317 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 YBX1P67809 324 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 IKQ13123 557 aaPredicted RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 ERCC6LQ2NKX8 1250 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 PABPC1LQ4VXU2 614 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 CFAP157Q5JU67 520 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 NOL9Q5SY16 702 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 TDRD10Q5VZ19 366 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 ADALQ6DHV7 355 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 CCSAPQ6IQ19 270 aaPredicted RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 TTLL10Q6ZVT0 673 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 BZW1Q7L1Q6 419 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 SLCO6A1Q86UG4 719 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 C11orf74Q86VG3 221 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SYCP3Q8IZU3 236 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SYT2Q8N9I0 419 aaPredicted RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 SMC1BQ8NDV3 1235 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 CNNM3Q8NE01 707 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SUN5Q8TC36 379 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 AFAP1L1Q8TED9 768 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SH3TC2Q8TF17 1288 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 LEO1Q8WVC0 666 aaPredicted RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 MAIP1Q8WWC4 291 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 MAML1Q92585 1016 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 USP6NLQ92738 828 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 ATP6V0A1Q93050 837 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 OPTNQ96CV9 577 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 HVCN1Q96D96 273 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 CDHR1Q96JP9 859 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 NEUROD6Q96NK8 337 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 LNPKQ9C0E8 428 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 VCPKMTQ9H867 229 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 AP5S1Q9NUS5 200 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 DCAF16Q9NXF7 216 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 MIS18AQ9NYP9 233 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 RTEL1Q9NZ71 1219 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 KLHL42Q9P2K6 505 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 MBD1Q9UIS9 605 aaPredicted RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 PPT2Q9UMR5 302 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 LZTS1Q9Y250 596 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 NOSIPQ9Y314 301 aaKnown RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 SH3GLB1Q9Y371 365 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 KCTD3Q9Y597 815 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SQORQ9Y6N5 450 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 CLTCL1P53675 1640 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 PTPN23Q9H3S7 1636 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SPATA31E1Q6ZUB1 1445 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 ERBINQ96RT1 1412 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SH3TC1Q8TE82 1336 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 TIAM1Q13009 1591 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 SHANK2Q9UPX8 1470 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 LRRD1A4D1F6 860 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 SCAMP3O14828 347 aaKnown RBP4.45□□□□□ -1.7
GPHN-210ENST00000555668 LSM1O15116 133 aaKnown RBP4.45□□□□□ -1.7
GPHN-210ENST00000555668 PRC1O43663 620 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 PLIN1O60240 522 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 SMIM24O75264 130 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 TADA3O75528 432 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 SKAP2O75563 359 aaPredicted RBP4.45□□□□□ -1.7
GPHN-210ENST00000555668 PARNO95453 639 aaKnown RBP4.45□□□□□ -1.7
GPHN-210ENST00000555668 TP53P04637 393 aaPredicted RBP4.45□□□□□ -1.7
GPHN-210ENST00000555668 GSTM1P09488 218 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 PRKCAP17252 672 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 ATP5JP18859 108 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 VIPR1P32241 457 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 MLH1P40692 756 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 GNAQP50148 359 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 PMS2P54278 862 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 CYP4F8P98187 520 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 SULT2A1Q06520 285 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 DMPKQ09013 629 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 TMEM62Q0P6H9 643 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 TUBA3CQ13748 450 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 BLMHQ13867 455 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 COL9A2Q14055 689 aaPredicted RBP4.45□□□□□ -1.7
GPHN-210ENST00000555668 KIR3DS1Q14943 382 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 RASA2Q15283 850 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 DDB1Q16531 1140 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 TRIM71Q2Q1W2 868 aaKnown RBP4.45□□□□□ -1.7
GPHN-210ENST00000555668 CCDC153Q494R4 210 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 CCDC40Q4G0X9 1142 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 SMUG1Q53HV7 270 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 RTP2Q5QGT7 225 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 DCAF15Q66K64 600 aa4.45□□□□□ -1.7
GPHN-210ENST00000555668 KAZNQ674X7 775 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms