RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 CALR3Q96L12 384 aaKnown RBP25.71■■□□□ 1.71
STRN3-207ENST00000555358 REEP2Q9BRK0 252 aa25.71■■□□□ 1.71
STRN3-207ENST00000555358 PAGR1Q9BTK6 254 aa25.71■■□□□ 1.71
STRN3-207ENST00000555358 ASCC2Q9H1I8 757 aaPredicted RBP25.71■■□□□ 1.71
STRN3-207ENST00000555358 TMBIM4Q9HC24 238 aa25.71■■□□□ 1.71
STRN3-207ENST00000555358 CEP104O60308 925 aa25.7■■□□□ 1.7
STRN3-207ENST00000555358 PPP1R37O75864 691 aa25.7■■□□□ 1.7
STRN3-207ENST00000555358 AKAP3O75969 853 aa25.7■■□□□ 1.7
STRN3-207ENST00000555358 JAM2P57087 298 aa25.7■■□□□ 1.7
STRN3-207ENST00000555358 IRX3P78415 501 aaPredicted RBP25.7■■□□□ 1.7
STRN3-207ENST00000555358 LRIG3Q6UXM1 1119 aa25.7■■□□□ 1.7
STRN3-207ENST00000555358 FBXL5Q9UKA1 691 aa25.7■■□□□ 1.7
STRN3-207ENST00000555358 H0YGN5 161 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 PDXKO00764 312 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 XRCC5P13010 732 aaKnown RBP25.69■■□□□ 1.7
STRN3-207ENST00000555358 HSD17B3P37058 310 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 PTGISQ16647 500 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 CEP85LQ5SZL2 805 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 LDLRAD1Q5T700 205 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 MIER3Q7Z3K6 550 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 SLFN11Q7Z7L1 901 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 METTL13Q8N6R0 699 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 NSUN6Q8TEA1 469 aaKnown RBP25.69■■□□□ 1.7
STRN3-207ENST00000555358 LXNQ9BS40 222 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 BCAS3Q9H6U6 928 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 NFS1Q9Y697 457 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 ANXA13P27216 316 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 CCND2P30279 289 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 UAP1Q16222 522 aaPredicted RBP25.69■■□□□ 1.7
STRN3-207ENST00000555358 NAA35Q5VZE5 725 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 MAATS1Q7Z4T9 603 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 R3HDMLQ9H3Y0 253 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 NOC2LQ9Y3T9 749 aaKnown RBP25.69■■□□□ 1.7
STRN3-207ENST00000555358 DOCK5Q9H7D0 1870 aa25.69■■□□□ 1.7
STRN3-207ENST00000555358 ASTN1O14525 1302 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 RSPH10B2B2RC85 870 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 PGRMC1O00264 195 aaKnown RBP25.68■■□□□ 1.7
STRN3-207ENST00000555358 RSPH10BP0C881 870 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 MDH1P40925 334 aaKnown RBP25.68■■□□□ 1.7
STRN3-207ENST00000555358 HLTFQ14527 1009 aaKnown RBP eCLIP25.68■■□□□ 1.7
STRN3-207ENST00000555358 BMT2Q1RMZ1 405 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.68■■□□□ 1.71e-8■■□□□ 12.7
STRN3-207ENST00000555358 AP1M1Q9BXS5 423 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 NEUROG2Q9H2A3 272 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 AGTPBP1Q9UPW5 1226 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 STXBP5LQ9Y2K9 1186 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 CALUO43852 315 aaPredicted RBP25.68■■□□□ 1.7
STRN3-207ENST00000555358 PTPROQ16827 1216 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 RINT1Q6NUQ1 792 aa25.68■■□□□ 1.7
STRN3-207ENST00000555358 SPATS2Q86XZ4 545 aaKnown RBP25.68■■□□□ 1.7
STRN3-207ENST00000555358 SART1O43290 800 aaKnown RBP25.67■■□□□ 1.7
STRN3-207ENST00000555358 RGS20O76081 388 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 DCAF17Q5H9S7 520 aaPredicted RBP25.67■■□□□ 1.7
STRN3-207ENST00000555358 DDX42Q86XP3 938 aaKnown RBP eCLIP25.67■■□□□ 1.7
STRN3-207ENST00000555358 RASGEF1CQ8N431 466 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 CHST13Q8NET6 341 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 SLC35C1Q96A29 364 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 SPATC1LQ9H0A9 340 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 CNTN2Q02246 1040 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 MMS22LQ6ZRQ5 1243 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 RIOX2Q8IUF8 465 aa25.67■■□□□ 1.7
STRN3-207ENST00000555358 SUGP1Q8IWZ8 645 aaKnown RBP25.67■■□□□ 1.7
STRN3-207ENST00000555358 ZNF473Q8WTR7 871 aaKnown RBP25.67■■□□□ 1.7
STRN3-207ENST00000555358 TYW1Q9NV66 732 aaKnown RBP25.67■■□□□ 1.7
STRN3-207ENST00000555358 A0A0A6YYK5 440 aaPredicted RBP25.66■■□□□ 1.7
STRN3-207ENST00000555358 SLC16A3O15427 465 aaKnown RBP25.66■■□□□ 1.7
STRN3-207ENST00000555358 CNMDO75829 334 aa25.66■■□□□ 1.7
STRN3-207ENST00000555358 NR3C1P04150 777 aa25.66■■□□□ 1.7
STRN3-207ENST00000555358 CASP4P49662 377 aa25.66■■□□□ 1.7
STRN3-207ENST00000555358 ANKRD35Q8N283 1001 aa25.66■■□□□ 1.7
STRN3-207ENST00000555358 DDX47Q9H0S4 455 aaKnown RBP25.66■■□□□ 1.7
STRN3-207ENST00000555358 TBC1D22BQ9NU19 505 aa25.66■■□□□ 1.7
STRN3-207ENST00000555358 SRRM3A6NNA2 597 aaPredicted RBP25.65■■□□□ 1.7
STRN3-207ENST00000555358 FSTL1Q12841 308 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 XRRA1Q6P2D8 792 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 KCTD17Q8N5Z5 321 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 OLIG1Q8TAK6 271 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 NACC1Q96RE7 527 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 TXNRD2Q9NNW7 524 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 SUCLA2Q9P2R7 463 aaPredicted RBP25.65■■□□□ 1.7
STRN3-207ENST00000555358 CCDC188H7C350 402 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 DDX3XO00571 662 aaKnown RBP eCLIP25.65■■□□□ 1.7
STRN3-207ENST00000555358 MEFVO15553 781 aaPredicted RBP25.65■■□□□ 1.7
STRN3-207ENST00000555358 GPAT2Q6NUI2 795 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 PEX26Q7Z412 305 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 NLRP14Q86W24 1093 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 NCAPG2Q86XI2 1143 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 MYCBPAPQ8TBZ2 947 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 LRRC45Q96CN5 670 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 METTL14Q9HCE5 456 aaKnown RBP25.65■■□□□ 1.7
STRN3-207ENST00000555358 GCNT4Q9P109 453 aa25.65■■□□□ 1.7
STRN3-207ENST00000555358 SFI1A8K8P3 1242 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 CCNE2O96020 404 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 H2AFZP0C0S5 128 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 SEC24CP53992 1094 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 GJB7Q6PEY0 223 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 C1orf186Q6ZWK4 172 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 H2AFVQ71UI9 128 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 OR2W6PQ8NHA6 318 aa25.64■■□□□ 1.7
STRN3-207ENST00000555358 SLC10A4Q96EP9 437 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms