RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 APBB1IPQ7Z5R6 666 aaPredicted RBP13.36□□□□□ -0.27
SRP54-206ENST00000555317 GPBP1Q86WP2 473 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
SRP54-206ENST00000555317 CNNM3Q8NE01 707 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 URGCPQ8TCY9 931 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 SYMPKQ92797 1274 aaKnown RBP13.36□□□□□ -0.27
SRP54-206ENST00000555317 CPB2Q96IY4 423 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 CCSER1Q9C0I3 900 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
SRP54-206ENST00000555317 KCNG1Q9UIX4 513 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
SRP54-206ENST00000555317 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 MYO7AQ13402 2215 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 CNTNAP2Q9UHC6 1331 aa13.36□□□□□ -0.27
SRP54-206ENST00000555317 A0A0C4DFX4 3053 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 H3BNC9 293 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 N4BP3O15049 544 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 YEATS4O95619 227 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 ARF4P18085 180 aaPredicted RBP13.35□□□□□ -0.27
SRP54-206ENST00000555317 LAG3P18627 525 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 GUCY2CP25092 1073 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 HOXA11P31270 313 aaPredicted RBP13.35□□□□□ -0.27
SRP54-206ENST00000555317 SMTNP53814 917 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 PEX3P56589 373 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
SRP54-206ENST00000555317 NAALADL2Q58DX5 795 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 ATL3Q6DD88 541 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 C1orf186Q6ZWK4 172 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 ZNF598Q86UK7 904 aaKnown RBP13.35□□□□□ -0.27
SRP54-206ENST00000555317 THNSL1Q8IYQ7 743 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 KCNG4Q8TDN1 519 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 LARP4BQ92615 738 aaKnown RBP13.35□□□□□ -0.27
SRP54-206ENST00000555317 RAD54LQ92698 747 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 LPPQ93052 612 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 EPSTI1Q96J88 318 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 ADPGKQ9BRR6 497 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 KIFC3Q9BVG8 833 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 C17orf75Q9HAS0 396 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 POLD4Q9HCU8 107 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 UBN1Q9NPG3 1134 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 KMT5AQ9NQR1 393 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 TFIP11Q9UBB9 837 aaKnown RBP13.35□□□□□ -0.27
SRP54-206ENST00000555317 INPP5FQ9Y2H2 1132 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 ATP6V1DQ9Y5K8 247 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 MTCH2Q9Y6C9 303 aa13.35□□□□□ -0.27
SRP54-206ENST00000555317 MORC2Q9Y6X9 1032 aaPredicted RBP13.35□□□□□ -0.27
SRP54-206ENST00000555317 BRWD1Q9NSI6 2320 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 C5orf67F2Z3F1 127 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 K7ERI5 159 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 B4GALT5O43286 388 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 LPXNO60711 386 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 ZNF623O75123 536 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 TBCAO75347 108 aaKnown RBP13.34□□□□□ -0.27
SRP54-206ENST00000555317 NPTXRO95502 500 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 ITGA4P13612 1032 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 ATF7P17544 494 aaPredicted RBP13.34□□□□□ -0.27
SRP54-206ENST00000555317 NCLP19338 710 aaKnown RBP13.34□□□□□ -0.27
SRP54-206ENST00000555317 POU3F3P20264 500 aaPredicted RBP13.34□□□□□ -0.27
SRP54-206ENST00000555317 NPTX2P47972 431 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 SLC12A3P55017 1021 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 FAM187BQ17R55 369 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 TIGD5Q53EQ6 642 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 CLLU1OSQ5K130 101 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 LINC00301Q8NCQ3 95 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 P2RX5Q93086 422 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 MRPL38Q96DV4 380 aaKnown RBP13.34□□□□□ -0.27
SRP54-206ENST00000555317 CASD1Q96PB1 797 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 RSAD1Q9HA92 442 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 TYW1Q9NV66 732 aaKnown RBP13.34□□□□□ -0.27
SRP54-206ENST00000555317 STK17AQ9UEE5 414 aa13.34□□□□□ -0.27
SRP54-206ENST00000555317 RBM19Q9Y4C8 960 aaKnown RBP13.34□□□□□ -0.27
SRP54-206ENST00000555317 CARNS1A5YM72 827 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 H0YCG3 227 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 ACKR2O00590 384 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 PPP6R2O75170 966 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 FAM13AO94988 1023 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 CSPG5O95196 566 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 PLS3P13797 630 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 PPM1AP35813 382 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 STAT6P42226 847 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 ME1P48163 572 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 STRN3Q13033 797 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 PKP1Q13835 747 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 MCM6Q14566 821 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 AMHR2Q16671 573 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 NOMO2Q5JPE7 1267 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 KLHL23Q8NBE8 558 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 COLGALT1Q8NBJ5 622 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 SLC17A8Q8NDX2 589 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 PPP2R3CQ969Q6 453 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 ZNF558Q96NG5 402 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.28
SRP54-206ENST00000555317 APOL6Q9BWW8 343 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 EIF2AQ9BY44 585 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms