RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 VAV3Q9UKW4 847 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 ATP8A1Q9Y2Q0 1164 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 GTPBP10A4D1E9 387 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 E7ENQ6 273 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 PODXLO00592 558 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 MSH4O15457 936 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 SUN1O94901 812 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 NCALDP61601 193 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 SARNPP82979 210 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 DR1Q01658 176 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 NFIL3Q16649 462 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 DPY19L2P1Q6NXN4 242 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 AGAP11Q8TF27 550 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 SELENOSQ9BQE4 189 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 REEP2Q9BRK0 252 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 KCNQ5Q9NR82 932 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 SLC5A4Q9NY91 659 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 USP15Q9Y4E8 981 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 FAM86B1E9PN63 330 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 EIF3DO15371 548 aaKnown RBP eCLIP11.52□□□□□ -0.572e-10■■□□□ 11.4
MTHFD1-210ENST00000555252 GDF11O95390 407 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 GGPS1O95749 300 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 FAM86B2P0C5J1 330 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 RARAP10276 462 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 XRCC5P13010 732 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 UCHL3P15374 230 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 FERP16591 822 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 ATP5DP30049 168 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 GCKP35557 465 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 LACTBP83111 547 aaPredicted RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 BNIP1Q12981 228 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 BLMHQ13867 455 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 SLC15A2Q16348 729 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 USH1GQ495M9 461 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 CAPRIN2Q6IMN6 1127 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 TBC1D1Q86TI0 1168 aaPredicted RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 SFR1Q86XK3 245 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 CFAP61Q8NHU2 1237 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 MDM1Q8TC05 714 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 ZNF483Q8TF39 744 aaPredicted RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 P2RX7Q99572 595 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 EIF2AK1Q9BQI3 630 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 ARHGEF3Q9NR81 526 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 TMOD2Q9NZR1 351 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 UBE4BO95155 1302 aa11.52□□□□□ -0.57
MTHFD1-210ENST00000555252 GH2P01242 217 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 SLURP2P0DP57 97 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 ITGA4P13612 1032 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 JAM2P57087 298 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 COPS2P61201 443 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 PSMC6P62333 389 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 CCDC15Q0P6D6 951 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 EXOC3L4Q17RC7 722 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 GRIPAP1Q4V328 841 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 MIS18BP1Q6P0N0 1132 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 STXBP4Q6ZWJ1 553 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 DAAM2Q86T65 1068 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 RFFLQ8WZ73 363 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 SPDL1Q96EA4 605 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 ELAC2Q9BQ52 826 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 DPH5Q9H2P9 285 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 GOPCQ9HD26 462 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 CTNNAL1Q9UBT7 734 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 SEL1LQ9UBV2 794 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 BACH1O14867 736 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 GJB6O95452 261 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 FGGP02679 453 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 NR3C1P04150 777 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 LMNB1P20700 586 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 CHRNA3P32297 505 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 STAT2P52630 851 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 HADHBP55084 474 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 ATP11AP98196 1134 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 ARID5AQ03989 594 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 THOC1Q96FV9 657 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 RAB3IPQ96QF0 476 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 TRIM7Q9C029 511 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 TAOK3Q9H2K8 898 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 TDRD3Q9H7E2 651 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 KCND2Q9NZV8 630 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 PCYOX1Q9UHG3 505 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 PCDHAC2Q9Y5I4 1007 aa11.51□□□□□ -0.57
MTHFD1-210ENST00000555252 KLHL33A6NCF5 533 aa11.5□□□□□ -0.57
MTHFD1-210ENST00000555252 ANKRD33BA6NCL7 494 aa11.5□□□□□ -0.57
MTHFD1-210ENST00000555252 MEIS1O00470 390 aa11.5□□□□□ -0.57
MTHFD1-210ENST00000555252 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-210ENST00000555252 PLA2G6O60733 806 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms