RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 ANAPC15P60006 121 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 BMS1Q14692 1282 aaKnown RBP17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 CES5AQ6NT32 575 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 ZNF280BQ86YH2 543 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 SLC22A17Q8WUG5 538 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 PGBD4Q96DM1 585 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 DYDC2Q96IM9 177 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 DZANK1Q9NVP4 752 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 NR2E1Q9Y466 385 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 GVINP1Q7Z2Y8 2422 aa17.52■□□□□ 0.4
ARHGEF40-205ENST00000555052 FAM186AA6NE01 2351 aa17.52■□□□□ 0.39
ARHGEF40-205ENST00000555052 FRYLO94915 3013 aa17.52■□□□□ 0.39
ARHGEF40-205ENST00000555052 CNTNAP2Q9UHC6 1331 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 C2CD4DB7Z1M9 353 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 ZBTB39O15060 712 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 SRGAP2CP0DJJ0 459 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 EPCAMP16422 314 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 MTHFRP42898 656 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 RNASELQ05823 741 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 NR5A1Q13285 461 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 GIT2Q14161 759 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 PTPN14Q15678 1187 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 NCAPH2Q6IBW4 605 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 KIAA1841Q6NSI8 718 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 SUGP1Q8IWZ8 645 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 SLFN12Q8IYM2 578 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 RSAD1Q9HA92 442 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 XPNPEP1Q9NQW7 623 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 BMP2KQ9NSY1 1161 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 ZNF292O60281 2723 aa17.51■□□□□ 0.39
ARHGEF40-205ENST00000555052 DENND4AQ7Z401 1863 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 ASAP2O43150 1006 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 DDHD2O94830 711 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 CA8P35219 290 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 AK2P54819 239 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 CYP4A11Q02928 519 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 RARS2Q5T160 578 aaKnown RBP17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 OTUD6AQ7L8S5 288 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 C12orf76Q8N812 135 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 RNF149Q8NC42 400 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 URGCPQ8TCY9 931 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 TCP11Q8WWU5 503 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 WASF1Q92558 559 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
ARHGEF40-205ENST00000555052 INPPL1O15357 1258 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 LILRB3O75022 631 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 SLITRK3O94933 977 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 LYPLA2O95372 231 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 LARGE1O95461 756 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 WEE2P0C1S8 567 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 KRT2P35908 639 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 PTPN5P54829 565 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 VCPP55072 806 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 PTENP60484 403 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 TCF15Q12870 199 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 ANKRD1Q15327 319 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 PCBP1Q15365 356 aaKnown RBP eCLIP17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 XKR9Q5GH70 373 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 KANK3Q6NY19 840 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 IFNLR1Q8IU57 520 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 SMG8Q8ND04 991 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 FEZF2Q8TBJ5 459 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 GTF3C6Q969F1 213 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 RIPOR3Q96MK2 946 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 MTRQ99707 1265 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 PRRX2Q99811 253 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 HSD17B14Q9BPX1 270 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 TMEM175Q9BSA9 504 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 KANSL3Q9P2N6 904 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 STK39Q9UEW8 545 aa17.49■□□□□ 0.39
ARHGEF40-205ENST00000555052 MARCH6O60337 910 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 TSPAN1O60635 241 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 ME3Q16798 604 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 PPFIBP1Q86W92 1011 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 TPH2Q8IWU9 490 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 NECAB1Q8N987 351 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 CCDC51Q96ER9 411 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 PHOX2BQ99453 314 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 EIF2AK1Q9BQI3 630 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 SORCS3Q9UPU3 1222 aa17.48■□□□□ 0.39
ARHGEF40-205ENST00000555052 WNT7AO00755 349 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 BRD1O95696 1058 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 EFEMP2O95967 443 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 PDGFBP01127 241 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 POMCP01189 267 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 AXLP30530 894 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 POU5F1BQ06416 359 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 MTMR3Q13615 1198 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 MXD4Q14582 209 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 AMHR2Q16671 573 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 ZBTB33Q86T24 672 aa17.47■□□□□ 0.39
ARHGEF40-205ENST00000555052 UBALD2Q8IYN6 164 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms