RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 ZCWPW2Q504Y3 356 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CBWD3Q5JTY5 395 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CBWD5Q5RIA9 395 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 C12orf60Q5U649 245 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 KAZNQ674X7 775 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 VSTM1Q6UX27 236 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ZNF34Q8IZ26 560 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 MYCT1Q8N699 235 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 RIC8AQ9NPQ8 531 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 PCNTO95613 3336 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 A0A0G2JND7 137 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 FOXN3O00409 490 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-217ENST00000555022 DDX3YO15523 660 aaKnown RBP9.54□□□□□ -0.88
SYNE2-217ENST00000555022 TBCAO75347 108 aaKnown RBP9.54□□□□□ -0.88
SYNE2-217ENST00000555022 PAEPP09466 180 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CHRNB2P17787 502 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 KRT15P19012 456 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ADCY8P40145 1251 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 SERPINB4P48594 390 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 GNAQP50148 359 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 PTENP60484 403 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 KRT17Q04695 432 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CERKLQ49MI3 558 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CGB2Q6NT52 195 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 SLC25A41Q8N5S1 370 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ANKLE1Q8NAG6 615 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 HIPK4Q8NE63 616 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 PRR11Q96HE9 360 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-217ENST00000555022 C10orf88Q9H8K7 445 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 AIPL1Q9NZN9 384 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CFAP73A6NFT4 308 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ASAP2O43150 1006 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 EDIL3O43854 480 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ZBED4O75132 1171 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 GJB6O95452 261 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 BAG2O95816 211 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 KCNA4P22459 653 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 BLMHQ13867 455 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ARSHQ5FYA8 562 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 C6orf118Q5T5N4 469 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 TAOK1Q7L7X3 1001 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 SCYL3Q8IZE3 742 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 MAB21L3Q8N8X9 362 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 FAM13CQ8NE31 585 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ZSWIM2Q8NEG5 633 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 UBE2TQ9NPD8 197 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-217ENST00000555022 UBN1Q9NPG3 1134 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CHST7Q9NS84 486 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 STK17AQ9UEE5 414 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 ARL2BPQ9Y2Y0 163 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 TAF1P21675 1872 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 SCN11AQ9UI33 1791 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 CFAP69A5D8W1 941 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-217ENST00000555022 RASA4BC9J798 803 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 RASA4O43374 803 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 PRPHP41219 470 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 GCLMP48507 274 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 PTDSS1P48651 473 aaKnown RBP9.53□□□□□ -0.88
SYNE2-217ENST00000555022 PAPOLAP51003 745 aaKnown RBP9.53□□□□□ -0.88
SYNE2-217ENST00000555022 RAB27AP51159 221 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 CACNB3P54284 484 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 ADCY2Q08462 1091 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 ZNF268Q14587 947 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-217ENST00000555022 ITIH4Q14624 930 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 RCN1Q15293 331 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 TPH2Q8IWU9 490 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 LMNTD2Q8IXW0 634 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 FAM186BQ8IYM0 893 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 SUCLA2Q9P2R7 463 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-217ENST00000555022 GGA2Q9UJY4 613 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 COL4A1P02462 1669 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 ANKRD62A6NC57 917 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 UBAP1LF5GYI3 381 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 SMAPO00193 183 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 GBP1P32455 592 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 BTDP43251 543 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 EIF3BP55884 814 aaKnown RBP9.53□□□□□ -0.88
SYNE2-217ENST00000555022 SETDB1Q15047 1291 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 RNF207Q6ZRF8 634 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 GSTA5Q7RTV2 222 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 ARMC9Q7Z3E5 817 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 SYCP3Q8IZU3 236 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 CCDC127Q96BQ5 260 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 MTMR9Q96QG7 549 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 SIPA1L3O60292 1781 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-217ENST00000555022 SLIT3O75094 1523 aa9.53□□□□□ -0.88
SYNE2-217ENST00000555022 PI4K2BG5E9Z4 385 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 O00370 1275 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 PPP1R11O60927 126 aaPredicted RBP9.52□□□□□ -0.88
SYNE2-217ENST00000555022 AGTP01019 485 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 HOXD13P35453 343 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 SCNN1BP51168 640 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 BNIP1Q12981 228 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 SGO2Q562F6 1265 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 RPUSD2Q8IZ73 545 aaKnown RBP9.52□□□□□ -0.88
SYNE2-217ENST00000555022 SYCE1Q8N0S2 351 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 RFFLQ8WZ73 363 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 HES6Q96HZ4 224 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms