RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 APBA1Q02410 837 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 RBL2Q08999 1139 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 MB21D1Q8N884 522 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 P2RX5Q93086 422 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 BHMTQ93088 406 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 DHTKD1Q96HY7 919 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 IL1RL2Q9HB29 575 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 CYP26B1Q9NR63 512 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TOPBP1Q92547 1522 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 MAP3K13O43283 966 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 USP17L8P0C7I0 530 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 PBLDP30039 288 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 USPL1Q5W0Q7 1092 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ITPRIPL1Q6GPH6 555 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 CENPPQ6IPU0 288 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TBCKQ8TEA7 893 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 PBKQ96KB5 322 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ALG13Q9NP73 1137 aaKnown RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ANGPT2O15123 496 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 VAMP4O75379 141 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TRIM71Q2Q1W2 868 aaKnown RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ERFEQ4G0M1 354 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 EFHC2Q5JST6 749 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TEDDM1Q5T9Z0 273 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 KRT39Q6A163 491 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 NEK9Q8TD19 979 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 PIGOQ8TEQ8 1089 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 DHX35Q9H5Z1 703 aaKnown RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ADAM22Q9P0K1 906 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 S100A5P33763 92 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ERFP50548 548 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 LUZP2Q86TE4 346 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 PPP1R13BQ96KQ4 1090 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 KLHL11Q9NVR0 708 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 SGSM2O43147 1006 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TLR2O60603 784 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 SEC24BO95487 1268 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 NUP62P37198 522 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 PEX3P56589 373 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 UBE2Q2Q8WVN8 375 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ERLEC1Q96DZ1 483 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 FHDC1Q9C0D6 1143 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ASCC2Q9H1I8 757 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 PCDHA7Q9UN72 937 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 BTBD18B2RXH4 712 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 IKBKBO14920 756 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CALB1P05937 261 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SOX13Q9UN79 622 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 KLHL18O94889 574 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ATP1A1P05023 1023 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PHKA1P46020 1223 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 DYNLL1P63167 89 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 IRAK1BP1Q5VVH5 260 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ALKBH2Q6NS38 261 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ELMO2Q96JJ3 720 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 FRMD6Q96NE9 622 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 EXOSC4Q9NPD3 245 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CD274Q9NZQ7 290 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CYP2D7A0A087X1C5 515 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 H0Y626 953 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 APOL1O14791 398 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 TRIM16O95361 564 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PCSK7Q16549 785 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SLFN12LQ6IEE8 588 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SNRNP48Q6IEG0 339 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 LRRC8BQ6P9F7 803 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 KANSL2Q9H9L4 492 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 MRPL40Q9NQ50 206 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 A0A087WWV3 80 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 KBTBD13C9JR72 458 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 FYNP06241 537 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RALBP11234 206 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RPS7P62081 194 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 C8orf34Q49A92 452 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SH3GL2Q99962 352 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 MAP3K20Q9NYL2 800 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SH3BP1Q9Y3L3 701 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PLB1Q6P1J6 1458 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SOWAHDA6NJG2 315 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RWDD2BP57060 319 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 YWHAZP63104 245 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 MAN2A1Q16706 1144 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SPATA2LQ8IUW3 424 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF274Q96GC6 653 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 EML4Q9HC35 981 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 FAM217BQ9NTX9 383 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PCDHB8Q9UN66 801 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RASSF9O75901 435 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 TOGARAM2Q6ZUX3 1019 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CYFIP1Q7L576 1253 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 DIS3LQ8TF46 1054 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 LATS2Q9NRM7 1088 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 NFU1Q9UMS0 254 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ARHGEF10O15013 1369 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 MLNP12872 115 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 NR1D1P20393 614 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PSMA3P25788 255 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 GUCA1AP43080 201 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms