RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 SLC39A11Q8N1S5 342 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 VN1R2Q8NFZ6 395 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 PIGOQ8TEQ8 1089 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 TMEM169Q96HH4 297 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 POP1Q99575 1024 aaKnown RBP13.22□□□□□ -0.29
PSMC6-207ENST00000554952 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
PSMC6-207ENST00000554952 TMEM60Q9H2L4 133 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 AGPAT5Q9NUQ2 364 aa13.22□□□□□ -0.29
PSMC6-207ENST00000554952 FSD2A1L4K1 749 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 DCXO43602 365 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 DGAT1O75907 488 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 ERLIN2O94905 339 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 CXCL14O95715 111 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 XRCC6P12956 609 aaKnown RBP eCLIP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 HOXA11P31270 313 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 TECP42680 631 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 NCBP1Q09161 790 aaKnown RBP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 GNL2Q13823 731 aaKnown RBP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 TFDP1Q14186 410 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 MRPL10Q7Z7H8 261 aaKnown RBP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 MRPL43Q8N983 215 aaKnown RBP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 FAM184AQ8NB25 1140 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 SMRP1Q8NCR6 262 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 GBP3Q9H0R5 595 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
PSMC6-207ENST00000554952 USP15Q9Y4E8 981 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-207ENST00000554952 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 INO80B-WBP1J3KQ70 363 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 GALTP07902 379 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 SRGAP2BP0DMP2 458 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
PSMC6-207ENST00000554952 PTENP60484 403 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
PSMC6-207ENST00000554952 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 AGMOQ6ZNB7 445 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 MAEAQ7L5Y9 396 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 VPS52Q8N1B4 723 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 FBXO18Q8NFZ0 1043 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 URGCPQ8TCY9 931 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 RSPH1Q8WYR4 309 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 KIF2CQ99661 725 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 APOL5Q9BWW9 433 aa13.2□□□□□ -0.3
PSMC6-207ENST00000554952 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-207ENST00000554952 SH2B1Q9NRF2 756 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-207ENST00000554952 ALDH2P05091 517 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 SPATA31C1P0DKV0 1188 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 ITGA4P13612 1032 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 ARL2P36404 184 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 RARRES1P49788 294 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
PSMC6-207ENST00000554952 C8orf34Q49A92 452 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 ANKRD54Q6NXT1 300 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 TMEM184AQ6ZMB5 413 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
PSMC6-207ENST00000554952 TMEM173Q86WV6 379 aaPredicted RBP13.19□□□□□ -0.3
PSMC6-207ENST00000554952 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 RPGRIP1Q96KN7 1286 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 FAM193BQ96PV7 902 aaPredicted RBP13.19□□□□□ -0.3
PSMC6-207ENST00000554952 NACC1Q96RE7 527 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 POLR3FQ9H1D9 316 aaPredicted RBP13.19□□□□□ -0.3
PSMC6-207ENST00000554952 RSAD1Q9HA92 442 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 KANSL3Q9P2N6 904 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
PSMC6-207ENST00000554952 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 TSPAN1O60635 241 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 USO1O60763 962 aaKnown RBP13.18□□□□□ -0.3
PSMC6-207ENST00000554952 CLASP2O75122 1294 aaKnown RBP13.18□□□□□ -0.3
PSMC6-207ENST00000554952 MED24O75448 989 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 DDHD2O94830 711 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 POMCP01189 267 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
PSMC6-207ENST00000554952 GLRA2P23416 452 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 AXLP30530 894 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 SLC11A1P49279 550 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 AFF1P51825 1210 aaKnown RBP13.18□□□□□ -0.3
PSMC6-207ENST00000554952 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 CAPSQ13938 189 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 KCNC3Q14003 757 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 PCBP1Q15365 356 aaKnown RBP eCLIP13.18□□□□□ -0.3
PSMC6-207ENST00000554952 TTC38Q5R3I4 469 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 NOSTRINQ8IVI9 506 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
PSMC6-207ENST00000554952 CNNM3Q8NE01 707 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 ERMNQ8TAM6 284 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
PSMC6-207ENST00000554952 PHF7Q9BWX1 381 aaPredicted RBP13.18□□□□□ -0.3
PSMC6-207ENST00000554952 EIF2AQ9BY44 585 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms