RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 CIDEBQ9UHD4 219 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 USP20Q9Y2K6 914 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 ESYT2A0FGR8 921 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 ITGA4P13612 1032 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 LSAMPQ13449 338 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 ZRSR2Q15696 482 aaKnown RBP16.81■□□□□ 0.28
SYNE3-203ENST00000554873 SLC18A3Q16572 532 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 SH2D4BQ5SQS7 431 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 LRRC8CQ8TDW0 803 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 SYN2Q92777 582 aaPredicted RBP16.81■□□□□ 0.28
SYNE3-203ENST00000554873 HAPLN3Q96S86 360 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 CELF4Q9BZC1 486 aaKnown RBP16.81■□□□□ 0.28
SYNE3-203ENST00000554873 CCDC113Q9H0I3 377 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 COMMD3-BMI1R4GMX3 469 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 BTNL10A8MVZ5 291 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 TRAF5O00463 557 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 PFDN1O60925 122 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
SYNE3-203ENST00000554873 MGAT5Q09328 741 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 ZCWPW2Q504Y3 356 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 KRT79Q5XKE5 535 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 CEP128Q6ZU80 1094 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 MYOCDQ8IZQ8 938 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 DNAJC19Q96DA6 116 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 CCDC97Q96F63 343 aaPredicted RBP16.8■□□□□ 0.28
SYNE3-203ENST00000554873 RTFDC1Q9BY42 306 aaPredicted RBP16.8■□□□□ 0.28
SYNE3-203ENST00000554873 RIOX1Q9H6W3 641 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 CEP72Q9P209 647 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 ECE2O60344 883 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
SYNE3-203ENST00000554873 POLR2FP61218 127 aaKnown RBP16.8■□□□□ 0.28
SYNE3-203ENST00000554873 USP46P62068 366 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 MKRN3Q13064 507 aaKnown RBP16.8■□□□□ 0.28
SYNE3-203ENST00000554873 LRRC14Q15048 493 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 TMEM119Q4V9L6 283 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 PROM2Q8N271 834 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 RASGEF1CQ8N431 466 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 METTL13Q8N6R0 699 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 TTC8Q8TAM2 541 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 CCDC28BQ9BUN5 200 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 AIPL1Q9NZN9 384 aa16.8■□□□□ 0.28
SYNE3-203ENST00000554873 BZW2Q9Y6E2 419 aaKnown RBP16.8■□□□□ 0.28
SYNE3-203ENST00000554873 FRMPD2Q68DX3 1309 aaPredicted RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 LDHCP07864 332 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 BPIFB4P59827 614 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 TMEM62Q0P6H9 643 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 SLC29A2Q14542 456 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 KPNB1Q14974 876 aaKnown RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 ZC3H18Q86VM9 953 aaKnown RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 ECHDC2Q86YB7 292 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 STKLD1Q8NE28 680 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 TRIM31Q9BZY9 425 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 ZDHHC18Q9NUE0 388 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 LARSQ9P2J5 1176 aaKnown RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 ROBO1Q9Y6N7 1651 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 HGSO14964 777 aaPredicted RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 COASYQ13057 564 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 GJA10Q969M2 543 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 GPR101Q96P66 508 aaPredicted RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 LSM14BQ9BX40 385 aaKnown RBP16.79■□□□□ 0.28
SYNE3-203ENST00000554873 FGFBP2Q9BYJ0 223 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 RAB34Q9BZG1 259 aa16.79■□□□□ 0.28
SYNE3-203ENST00000554873 RBM47A0AV96 593 aaKnown RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 BTDP43251 543 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 POU5F1Q01860 360 aaKnown RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 MPP3Q13368 585 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 CCDC6Q16204 474 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 KCTD19Q17RG1 926 aaPredicted RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 FOXR2Q6PJQ5 311 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 TPTE2Q6XPS3 522 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 VSIG1Q86XK7 387 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 MGARPQ8TDB4 240 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 CKAP2Q8WWK9 683 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 TRIM51Q9BSJ1 452 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 LRRC27Q9C0I9 530 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 ADCY7P51828 1080 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 GSTA3Q16772 222 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 SNX30Q5VWJ9 437 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 RNF168Q8IYW5 571 aaPredicted RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 TBC1D10AQ9BXI6 508 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 PACSIN1Q9BY11 444 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 DENND2DQ9H6A0 471 aaPredicted RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 TBC1D7Q9P0N9 293 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 NARFQ9UHQ1 456 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 A0A087X0T9 212 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 ENTPD5O75356 428 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 FAM228BP0C875 321 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 ARID5AQ03989 594 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 AUHQ13825 339 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms