RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 TIGD5Q53EQ6 642 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 UBXN11Q5T124 520 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 SLC27A1Q6PCB7 646 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 LRRC55Q6ZSA7 311 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 HACE1Q8IYU2 909 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 PRUNE2Q8WUY3 3088 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 LPPQ93052 612 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 CPB2Q96IY4 423 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 USP28Q96RU2 1077 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 RUSC1Q9BVN2 902 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 TRIM6Q9C030 488 aaPredicted RBP14.62□□□□□ -0.07
APEX1-208ENST00000554813 CCSER1Q9C0I3 900 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 CWH43Q9H720 699 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 ALG13Q9NP73 1137 aaKnown RBP14.62□□□□□ -0.07
APEX1-208ENST00000554813 KANSL3Q9P2N6 904 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 MORC2Q9Y6X9 1032 aaPredicted RBP14.62□□□□□ -0.07
APEX1-208ENST00000554813 CNTNAP2Q9UHC6 1331 aa14.62□□□□□ -0.07
APEX1-208ENST00000554813 FNDC1Q4ZHG4 1894 aaPredicted RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 NLRC5Q86WI3 1866 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 CARNS1A5YM72 827 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 K7ERI5 159 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 ACKR2O00590 384 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 B4GALT5O43286 388 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 OFD1O75665 1012 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 ITGB1P05556 798 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 ITGA4P13612 1032 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 TXLNAP40222 546 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 ALDH7A1P49419 539 aaKnown RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 SLC12A3P55017 1021 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 PEX3P56589 373 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 DMP1Q13316 513 aaPredicted RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 PRPF4BQ13523 1007 aaKnown RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 TMEM132AQ24JP5 1023 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 NOMO2Q5JPE7 1267 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 THNSL1Q8IYQ7 743 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 COLGALT1Q8NBJ5 622 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 SPPL3Q8TCT6 385 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 URGCPQ8TCY9 931 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 ATXN2LQ8WWM7 1075 aaKnown RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 ZNF558Q96NG5 402 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 THEGQ9P2T0 379 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 CCDC39Q9UFE4 941 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 PUF60Q9UHX1 559 aaKnown RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 FBXO2Q9UK22 296 aaPredicted RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 COG5Q9UP83 839 aa14.61□□□□□ -0.07
APEX1-208ENST00000554813 RBM19Q9Y4C8 960 aaKnown RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 PRRC2BQ5JSZ5 2229 aaKnown RBP14.61□□□□□ -0.07
APEX1-208ENST00000554813 FGF18O76093 207 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 PRKCBP05771 671 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 LIG1P18858 919 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 PPM1AP35813 382 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 NPTX2P47972 431 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 NASPP49321 788 aaPredicted RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 SMTNP53814 917 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 KRT17Q04695 432 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 UBE3AQ05086 875 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 RNASELQ05823 741 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 KARSQ15046 597 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 STK38Q15208 465 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 AAK1Q2M2I8 961 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 FOXD4L5Q5VV16 416 aaPredicted RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 KCNT2Q6UVM3 1135 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 AGMOQ6ZNB7 445 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 SMG8Q8ND04 991 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 FOXD4L4Q8WXT5 416 aaPredicted RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 EPSTI1Q96J88 318 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 NTPCRQ9BSD7 190 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 EIF2AQ9BY44 585 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 NSUN3Q9H649 340 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 RSAD1Q9HA92 442 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 KMT5AQ9NQR1 393 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 PRDM6Q9NQX0 595 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 SPG21Q9NZD8 308 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 TFIP11Q9UBB9 837 aaKnown RBP14.6□□□□□ -0.07
APEX1-208ENST00000554813 INPP5FQ9Y2H2 1132 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 IPPQ9Y573 584 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 PHLPP2Q6ZVD8 1323 aa14.6□□□□□ -0.07
APEX1-208ENST00000554813 COL4A4P53420 1690 aaPredicted RBP14.59□□□□□ -0.07
APEX1-208ENST00000554813 MEIS3P2A8K0S8 358 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 SFI1A8K8P3 1242 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 N4BP3O15049 544 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 F13A1P00488 732 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 PLCG1P19174 1290 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 DDIT3P35638 169 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 PLCB3Q01970 1234 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 RAD51AP2Q09MP3 1159 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 BECN1Q14457 450 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 DHX8Q14562 1220 aaKnown RBP14.59□□□□□ -0.07
APEX1-208ENST00000554813 SPECC1Q5M775 1068 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 ATL3Q6DD88 541 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 DAW1Q8N136 415 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 LINC00301Q8NCQ3 95 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 MICAL1Q8TDZ2 1067 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 POF1BQ8WVV4 589 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 RAD54LQ92698 747 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 HLA-CQ95604 372 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 PPP2R3CQ969Q6 453 aa14.59□□□□□ -0.07
APEX1-208ENST00000554813 CLIC6Q96NY7 704 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms