RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 SIAH1Q8IUQ4 282 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 MYCBPQ99417 103 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 TEKT3Q9BXF9 490 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 OSBPL7Q9BZF2 842 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 KCNK9Q9NPC2 374 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 DBR1Q9UK59 544 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 CD2APQ9Y5K6 639 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 NCANO14594 1321 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ATXN2Q99700 1313 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 RASGRF2O14827 1237 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 HGSO14964 777 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 PHF2O75151 1096 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ARP10275 920 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 CHRNA5P30532 468 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ECE1P42892 770 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 STAT2P52630 851 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 DLG4P78352 724 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 MIER3Q7Z3K6 550 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 PHLDB2Q86SQ0 1253 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ARHGEF19Q8IW93 802 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ATP8B4Q8TF62 1192 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 KAT5Q92993 513 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 CSRNP1Q96S65 589 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 SEL1LQ9UBV2 794 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ASIC3Q9UHC3 531 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 BAIAP2L1Q9UHR4 511 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 SYNGAP1Q96PV0 1343 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 MIF4GDA9UHW6 222 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 DNM1LO00429 736 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 CHRNA3P32297 505 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 SCTRP47872 440 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 VPS41P49754 854 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 VAMP7P51809 220 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 DRP2Q13474 957 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 PPP2R5AQ15172 486 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 FAM133BQ5BKY9 247 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ANKRD20A8PQ5CZ79 823 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 HIBCHQ6NVY1 386 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ARMC9Q7Z3E5 817 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 PNMA8AQ86V59 439 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ANKRD42Q8N9B4 389 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 EPS8L3Q8TE67 593 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 TATDN2Q93075 761 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 RNF25Q96BH1 459 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ZNF653Q96CK0 615 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 NCAPGQ9BPX3 1015 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 UNC45AQ9H3U1 944 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 ACP6Q9NPH0 428 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 LARSQ9P2J5 1176 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 SRRM3A6NNA2 597 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 TCP10L2B9ZVM9 353 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 POLRMTO00411 1230 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 KIAA0391O15091 583 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 DRD4P21917 467 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 SSR1P43307 286 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 RPL21P46778 160 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 MAP2K1Q02750 393 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 CLUL1Q15846 466 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 CEP55Q53EZ4 464 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 SWT1Q5T5J6 900 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 C6orf89Q6UWU4 347 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 PARP9Q8IXQ6 854 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 LRRC34Q8IZ02 419 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 CRYGNQ8WXF5 182 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ZDHHC15Q96MV8 337 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 PRMT1Q99873 361 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 FAM129AQ9BZQ8 928 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ARHGEF10LQ9HCE6 1279 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 MLXIPLQ9NP71 852 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 PARP2Q9UGN5 583 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 KIF13BQ9NQT8 1826 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ZMYM2Q9UBW7 1377 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 LOC102724159A0A0B4J2E5 919 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 CYP26A1O43174 497 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 SGPL1O95470 568 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ACSL3O95573 720 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 TNIP1Q15025 636 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 LRRC14Q15048 493 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 PWP2Q15269 919 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 TRIP13Q15645 432 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 SPRED3Q2MJR0 410 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ZFYVE27Q5T4F4 411 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ACER1Q8TDN7 264 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ELMO3Q96BJ8 720 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 CBWD1Q9BRT8 395 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 PAGR1Q9BTK6 254 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 WDR11Q9BZH6 1224 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 NSRP1Q9H0G5 558 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 TMOD2Q9NZR1 351 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 GGA2Q9UJY4 613 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 NENFQ9UMX5 172 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms