RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 TRIM10Q9UDY6 481 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 RABGEF1Q9UJ41 708 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 M0R2C6 588 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 DNAJC6O75061 913 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 SERPINI2O75830 405 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 MYBL1P10243 752 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 EEF1B2P24534 225 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 RAP1GDS1P52306 607 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 DRG2P55039 364 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 TFAP4Q01664 338 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 PTPN12Q05209 780 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 NAALADL2Q58DX5 795 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 KCNV1Q6PIU1 500 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 MTHFD1LQ6UB35 978 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 TMC3Q7Z5M5 1100 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 OR2W6PQ8NHA6 318 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 PBXIP1Q96AQ6 731 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 DGCR14Q96DF8 476 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 TMEM237Q96Q45 408 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 BTBD10Q9BSF8 475 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 DCTN4Q9UJW0 460 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 PHTF1Q9UMS5 762 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 FRMPD1Q5SYB0 1578 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 PDE8AO60658 829 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 KRT16P08779 473 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 MTTPP55157 894 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 NLRP11P59045 1033 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 ACAD11Q709F0 780 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 GPR141Q7Z602 305 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 SCUBE1Q8IWY4 988 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 LRRC43Q8N309 656 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 SCG3Q8WXD2 468 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 RPGRQ92834 1020 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 LRRC59Q96AG4 307 aaKnown RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 NT5C1BQ96P26 610 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 RPS6KC1Q96S38 1066 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 CSRNP1Q96S65 589 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 FRMD8Q9BZ67 464 aaPredicted RBP6.82□□□□□ -1.32
PCNX1-207ENST00000554691 C1orf112Q9NSG2 853 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 UVRAGQ9P2Y5 699 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 SORCS3Q9UPU3 1222 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 STARD13Q9Y3M8 1113 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 MYO5CQ9NQX4 1742 aa6.82□□□□□ -1.32
PCNX1-207ENST00000554691 TRIM49BA6NDI0 452 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 ZNF233A6NK53 670 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 FOXN1O15353 648 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 LPXNO60711 386 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 SUPT3HO75486 399 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 CTDNEP1O95476 244 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 FOSP01100 380 aaPredicted RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 FDPSP14324 419 aaKnown RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 CENPCQ03188 943 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 RPS6KA2Q15349 733 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 RINT1Q6NUQ1 792 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 LRRC8BQ6P9F7 803 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 IZUMO2Q6UXV1 221 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 NANOGNBQ7Z5D8 188 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 TRIM59Q8IWR1 403 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 MIGA1Q8NAN2 632 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 TNIP2Q8NFZ5 429 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 MS4A14Q96JA4 679 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 RIOK1Q9BRS2 568 aaKnown RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 TMED5Q9Y3A6 229 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 MAD1L1Q9Y6D9 718 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 PBRM1Q86U86 1689 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 EIF4E1BA6NMX2 242 aaKnown RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 IRS4O14654 1257 aaPredicted RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 BACH1O14867 736 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 PENKP01210 267 aaPredicted RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 GLI1P08151 1106 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 MTFR1Q15390 333 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 AAGABQ6PD74 315 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 KCTD17Q8N5Z5 321 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 MDM1Q8TC05 714 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 SCFD1Q8WVM8 642 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 TTC17Q96AE7 1141 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 CFAP36Q96G28 342 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 AIFM3Q96NN9 605 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 MTRQ99707 1265 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 AGPAT5Q9NUQ2 364 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 USTQ9Y2C2 406 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 NEURL4Q96JN8 1562 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 SPHKAPQ2M3C7 1700 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 SGK1O00141 431 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 SLC16A3O15427 465 aaKnown RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 CCDC159P0C7I6 412 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 EPHB1P54762 984 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 MAP3K7CLP57077 242 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 ARPC4P59998 168 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 PDAP1Q13442 181 aaKnown RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 EDRF1Q3B7T1 1238 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 CMPK2Q5EBM0 449 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 ZFP1Q6P2D0 407 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 TMEM139Q8IV31 216 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 TSEN2Q8NCE0 465 aaKnown RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 RBM46Q8TBY0 533 aaKnown RBP6.81□□□□□ -1.32
PCNX1-207ENST00000554691 CALML6Q8TD86 181 aa6.81□□□□□ -1.32
PCNX1-207ENST00000554691 LRMDAQ9H2I8 198 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms