RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PMS1P54277 932 aaKnown RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 NLRP11P59045 1033 aaKnown RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 ZNF200P98182 395 aaPredicted RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 KCNA1Q09470 495 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 HIC1Q14526 733 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 FAM187BQ17R55 369 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 SLFN12LQ6IEE8 588 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 ZPBP2Q6X784 338 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 KSR1Q8IVT5 923 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 TMEM174Q8WUU8 243 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 DNAJB3Q8WWF6 145 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 PRIMPOLQ96LW4 560 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 MED15Q96RN5 788 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 FDXACB1Q9BRP7 624 aaPredicted RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 SRRTQ9BXP5 876 aaKnown RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 MRPL4Q9BYD3 311 aaKnown RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 CCDC113Q9H0I3 377 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 FANCLQ9NW38 375 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 KAT6AQ92794 2004 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 HTTP42858 3142 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 TGFB1I1O43294 461 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 NR3C1P04150 777 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 TPM2P07951 284 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 NR2F2P24468 414 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 EEF1GP26641 437 aaKnown RBP15.74■□□□□ 0.11
SHOX2-206ENST00000554685 NCBP1Q09161 790 aaKnown RBP15.74■□□□□ 0.11
SHOX2-206ENST00000554685 ADAM9Q13443 819 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 CDKAL1Q5VV42 579 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 ARMCX5Q6P1M9 558 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 ZC3H3Q8IXZ2 948 aaKnown RBP15.74■□□□□ 0.11
SHOX2-206ENST00000554685 CCDC155Q8N6L0 562 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 PPP1R13LQ8WUF5 828 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 ADAMTS10Q9H324 1103 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 IFT122Q9HBG6 1241 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 TRPV2Q9Y5S1 764 aa15.74■□□□□ 0.11
SHOX2-206ENST00000554685 ACKR2O00590 384 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 SLC16A3O15427 465 aaKnown RBP15.73■□□□□ 0.11
SHOX2-206ENST00000554685 TLR3O15455 904 aaKnown RBP15.73■□□□□ 0.11
SHOX2-206ENST00000554685 GPR32O75388 356 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 ERLIN2O94905 339 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 ZNF18P17022 549 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 GARTP22102 1010 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 CRYBB1P53674 252 aaPredicted RBP15.73■□□□□ 0.11
SHOX2-206ENST00000554685 MRPS6P82932 125 aaKnown RBP15.73■□□□□ 0.11
SHOX2-206ENST00000554685 MBTD1Q05BQ5 628 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 TMEM132AQ24JP5 1023 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 LRRC55Q6ZSA7 311 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 TAS1R3Q7RTX0 852 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 CTAGE1Q96RT6 745 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 MKNK1Q9BUB5 465 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 FZD8Q9H461 694 aa15.73■□□□□ 0.11
SHOX2-206ENST00000554685 CBFA2T2O43439 604 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 TOM1L1O75674 476 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 SERPINC1P01008 464 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 TPM3P06753 285 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 EPB41P11171 864 aaKnown RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 SFPQP23246 707 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 EIF4BP23588 611 aaKnown RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 CDK7P50613 346 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 PRPF4BQ13523 1007 aaKnown RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 KIZQ2M2Z5 673 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 SARM1Q6SZW1 724 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 APBB1IPQ7Z5R6 666 aaPredicted RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 PPP1R16BQ96T49 567 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 CELF4Q9BZC1 486 aaKnown RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 SENP6Q9GZR1 1112 aaPredicted RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 MCOLN1Q9GZU1 580 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 METTL14Q9HCE5 456 aaKnown RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 KIAA1586Q9HCI6 787 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 SAMSN1Q9NSI8 373 aaKnown RBP15.72■□□□□ 0.11
SHOX2-206ENST00000554685 DMAC2Q9NW81 257 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 FRMD4BQ9Y2L6 1034 aa15.72■□□□□ 0.11
SHOX2-206ENST00000554685 KCNJ18B7U540 433 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 CLIC2O15247 247 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 EXOC3O60645 756 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 DARSP14868 501 aaKnown RBP15.71■□□□□ 0.11
SHOX2-206ENST00000554685 AXLP30530 894 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 PSMC2P35998 433 aaKnown RBP15.71■□□□□ 0.11
SHOX2-206ENST00000554685 PLCB2Q00722 1185 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 KCNJ12Q14500 433 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 FILIP1LQ4L180 1135 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 XXYLT1Q8NBI6 393 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 CAGE1Q8TC20 777 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 POMGNT1Q8WZA1 660 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 ZNF668Q96K58 619 aaPredicted RBP15.71■□□□□ 0.11
SHOX2-206ENST00000554685 CNOT6LQ96LI5 555 aaKnown RBP15.71■□□□□ 0.11
SHOX2-206ENST00000554685 OSMRQ99650 979 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 TARS2Q9BW92 718 aaKnown RBP15.71■□□□□ 0.11
SHOX2-206ENST00000554685 HSD3B7Q9H2F3 369 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
SHOX2-206ENST00000554685 GINS2Q9Y248 185 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 CDY2AQ9Y6F7 541 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 STYXL1Q9Y6J8 313 aa15.71■□□□□ 0.11
SHOX2-206ENST00000554685 CNTNAP2Q9UHC6 1331 aa15.7■□□□□ 0.1
SHOX2-206ENST00000554685 MAPK13O15264 365 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms