RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PLA2G4FQ68DD2 849 aa27.1■■□□□ 1.93
FOXA1-204ENST00000554607 AGMOQ6ZNB7 445 aa27.1■■□□□ 1.93
FOXA1-204ENST00000554607 C15orf39Q6ZRI6 1047 aa27.1■■□□□ 1.93
FOXA1-204ENST00000554607 RSAD1Q9HA92 442 aa27.1■■□□□ 1.93
FOXA1-204ENST00000554607 SSX2IPQ9Y2D8 614 aa27.1■■□□□ 1.93
FOXA1-204ENST00000554607 PLXNA3P51805 1871 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 REC8O95072 547 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 CNPP09543 421 aaKnown RBP27.09■■□□□ 1.93
FOXA1-204ENST00000554607 TDGQ13569 410 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 CPLX2Q6PUV4 134 aaKnown RBP27.09■■□□□ 1.93
FOXA1-204ENST00000554607 KRT25Q7Z3Z0 450 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 CNNM3Q8NE01 707 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 PSPC1Q8WXF1 523 aaKnown RBP27.09■■□□□ 1.93
FOXA1-204ENST00000554607 CEP170P1Q96L14 293 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 FAM20AQ96MK3 541 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 SLKQ9H2G2 1235 aaPredicted RBP27.09■■□□□ 1.93
FOXA1-204ENST00000554607 UBN1Q9NPG3 1134 aa27.09■■□□□ 1.93
FOXA1-204ENST00000554607 DDHD2O94830 711 aa27.08■■□□□ 1.93
FOXA1-204ENST00000554607 SSBP05455 408 aaKnown RBP eCLIP27.08■■□□□ 1.93
FOXA1-204ENST00000554607 P4HBP07237 508 aaKnown RBP27.08■■□□□ 1.93
FOXA1-204ENST00000554607 RFC5P40937 340 aa27.08■■□□□ 1.93
FOXA1-204ENST00000554607 PPP2R5CQ13362 524 aa27.08■■□□□ 1.93
FOXA1-204ENST00000554607 ELMSAN1Q6PJG2 1045 aa27.08■■□□□ 1.93
FOXA1-204ENST00000554607 RUFY3Q7L099 469 aa27.08■■□□□ 1.93
FOXA1-204ENST00000554607 ASCL5Q7RTU5 278 aa27.08■■□□□ 1.93
FOXA1-204ENST00000554607 PRPF31Q8WWY3 499 aaKnown RBP27.08■■□□□ 1.93
FOXA1-204ENST00000554607 DPP7Q9UHL4 492 aa27.08■■□□□ 1.93
FOXA1-204ENST00000554607 EML1O00423 815 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 ASAP2O43150 1006 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 LILRB3O75022 631 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 SRGAP2CP0DJJ0 459 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 NPEPPSP55786 919 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 LETM2Q2VYF4 491 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 FLCNQ8NFG4 579 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 TCP11Q8WWU5 503 aa27.07■■□□□ 1.92
FOXA1-204ENST00000554607 ZNF274Q96GC6 653 aaPredicted RBP27.07■■□□□ 1.92
FOXA1-204ENST00000554607 DHX33Q9H6R0 707 aaKnown RBP27.07■■□□□ 1.92
FOXA1-204ENST00000554607 PRR23AA6NEV1 266 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 NRP1O14786 923 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 GAS2O43903 313 aaKnown RBP27.06■■□□□ 1.92
FOXA1-204ENST00000554607 B4GALT3O60512 393 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 NCLP19338 710 aaKnown RBP27.06■■□□□ 1.92
FOXA1-204ENST00000554607 TOB2Q14106 344 aaPredicted RBP27.06■■□□□ 1.92
FOXA1-204ENST00000554607 INF2Q27J81 1249 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 CYP26C1Q6V0L0 522 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 CMASQ8NFW8 434 aaPredicted RBP27.06■■□□□ 1.92
FOXA1-204ENST00000554607 IGSF9Q9P2J2 1179 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 DUSP12Q9UNI6 340 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 DENND4AQ7Z401 1863 aa27.06■■□□□ 1.92
FOXA1-204ENST00000554607 SLC37A4O43826 429 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 POMCP01189 267 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 SOD2P04179 222 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 URODP06132 367 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 HOXA11P31270 313 aaPredicted RBP27.05■■□□□ 1.92
FOXA1-204ENST00000554607 FOXK2Q01167 660 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 LAMTOR4Q0VGL1 99 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 NPY5RQ15761 445 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 OTUD6AQ7L8S5 288 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 TMEM143Q96AN5 459 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 KCNK12Q9HB15 430 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 ZSWIM6Q9HCJ5 1215 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 FBXL21Q9UKT6 434 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 VAV3Q9UKW4 847 aa27.05■■□□□ 1.92
FOXA1-204ENST00000554607 ADH1AP07327 375 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 GCFC2P16383 781 aaKnown RBP27.04■■□□□ 1.92
FOXA1-204ENST00000554607 AOC1P19801 751 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 AFF1P51825 1210 aaKnown RBP27.04■■□□□ 1.92
FOXA1-204ENST00000554607 PCBP1Q15365 356 aaKnown RBP eCLIP27.04■■□□□ 1.92
FOXA1-204ENST00000554607 UBXN11Q5T124 520 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 PPP4R3AQ6IN85 833 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 C4orf19Q8IY42 314 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 NKD2Q969F2 451 aaPredicted RBP27.04■■□□□ 1.92
FOXA1-204ENST00000554607 RPS6KC1Q96S38 1066 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 RTP3Q9BQQ7 232 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 HERC2P3Q9BVR0 1158 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 MINDY3Q9H8M7 445 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 KCNMB3Q9NPA1 279 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 CYP46A1Q9Y6A2 500 aa27.04■■□□□ 1.92
FOXA1-204ENST00000554607 MYO15AQ9UKN7 3530 aa27.03■■□□□ 1.92
FOXA1-204ENST00000554607 CCDC194A0A1B0GVG4 234 aa27.03■■□□□ 1.92
FOXA1-204ENST00000554607 ITGA4P13612 1032 aa27.03■■□□□ 1.92
FOXA1-204ENST00000554607 AK2P54819 239 aa27.03■■□□□ 1.92
FOXA1-204ENST00000554607 RIF1Q5UIP0 2472 aaKnown RBP27.03■■□□□ 1.92
FOXA1-204ENST00000554607 CWF19L1Q69YN2 538 aaKnown RBP27.03■■□□□ 1.92
FOXA1-204ENST00000554607 ZNF579Q8NAF0 562 aaKnown RBP27.03■■□□□ 1.92
FOXA1-204ENST00000554607 FEZF2Q8TBJ5 459 aa27.03■■□□□ 1.92
FOXA1-204ENST00000554607 STAMQ92783 540 aa27.03■■□□□ 1.92
FOXA1-204ENST00000554607 NAP1L4Q99733 375 aaKnown RBP27.03■■□□□ 1.92
FOXA1-204ENST00000554607 RHOBTB2Q9BYZ6 727 aa27.03■■□□□ 1.92
FOXA1-204ENST00000554607 C2CD2LO14523 706 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 TBX3O15119 743 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 EPB41L2O43491 1005 aaKnown RBP27.02■■□□□ 1.92
FOXA1-204ENST00000554607 MARCH6O60337 910 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 ERLIN2O94905 339 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 AXLP30530 894 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 NCBP1Q09161 790 aaKnown RBP27.02■■□□□ 1.92
FOXA1-204ENST00000554607 EPHA7Q15375 998 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 FRMD5Q7Z6J6 570 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 NEK8Q86SG6 692 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 RNF149Q8NC42 400 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms