RNA–Protein interactions for RNA: ENST00000554133.5

LINC01578-202, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2

Gene LINC01578, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-202ENST00000554133 SMPD4Q9NXE4 827 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 SERPINB13Q9UIV8 391 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 MYPNQ86TC9 1320 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 A6NNZ2 444 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 SRGAP3O43295 1099 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PQBP1O60828 265 aaKnown RBP4.19□□□□□ -1.74
LINC01578-202ENST00000554133 TUSC2O75896 110 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PCDH8O95206 1070 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PFKMP08237 780 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 MYL3P08590 195 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 C6P13671 934 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PTGS1P23219 599 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 CCT2P78371 535 aaKnown RBP4.19□□□□□ -1.74
LINC01578-202ENST00000554133 MALLQ13021 153 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 C1orf228Q6PIY5 440 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 UNQ6494/PRO21346Q6UXR6 183 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 TOGARAM2Q6ZUX3 1019 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 SRLQ86TD4 932 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 NLRX1Q86UT6 975 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 FAM156AQ8NDB6 213 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 WDR48Q8TAF3 677 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PPP1R35Q8TAP8 253 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 TOE1Q96GM8 510 aaKnown RBP4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PPCSQ9HAB8 311 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PLCB1Q9NQ66 1216 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 BTBD7Q9P203 1132 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 PRSS50Q9UI38 385 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 TMPRSS11EQ9UL52 423 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 USP18Q9UMW8 372 aa4.19□□□□□ -1.74
LINC01578-202ENST00000554133 CCDC154A6NI56 674 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 UBXN7O94888 489 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 RPLP2P05387 115 aaKnown RBP4.18□□□□□ -1.74
LINC01578-202ENST00000554133 XPAP23025 273 aaPredicted RBP4.18□□□□□ -1.74
LINC01578-202ENST00000554133 RGS3P49796 1198 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 CACNB3P54284 484 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 PPARAQ07869 468 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 TRIM25Q14258 630 aaKnown RBP4.18□□□□□ -1.74
LINC01578-202ENST00000554133 NR1I3Q14994 352 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 LONRF1Q17RB8 773 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 MUM1L1Q5H9M0 696 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 KLHDC10Q6PID8 442 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 KANSL1Q7Z3B3 1105 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 APBB1IPQ7Z5R6 666 aaPredicted RBP4.18□□□□□ -1.74
LINC01578-202ENST00000554133 IFNL2Q8IZJ0 200 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 VPS37AQ8NEZ2 397 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 TSPEARQ8WU66 669 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 SHISA4Q96DD7 197 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 DDX11Q96FC9 970 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 NAA15Q9BXJ9 866 aaKnown RBP4.18□□□□□ -1.74
LINC01578-202ENST00000554133 UBA5Q9GZZ9 404 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 TNFRSF12AQ9NP84 129 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 KMT5AQ9NQR1 393 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 DTLQ9NZJ0 730 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 DMTF1Q9Y222 760 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 CDY2AQ9Y6F7 541 aa4.18□□□□□ -1.74
LINC01578-202ENST00000554133 CCDC189A1A4V9 331 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 GOLIM4O00461 696 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 HTRA2O43464 458 aaPredicted RBP4.17□□□□□ -1.74
LINC01578-202ENST00000554133 B3GALT2O43825 422 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 SH3BP5O60239 455 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 TCEA3O75764 348 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 MPOP05164 745 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 ENO2P09104 434 aaPredicted RBP4.17□□□□□ -1.74
LINC01578-202ENST00000554133 TACR2P21452 398 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 SERPINB3P29508 390 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 MC4RP32245 332 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 GPR15P49685 360 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 CHAF1AQ13111 956 aaPredicted RBP4.17□□□□□ -1.74
LINC01578-202ENST00000554133 IFIT5Q13325 482 aaKnown RBP4.17□□□□□ -1.74
LINC01578-202ENST00000554133 NOLC1Q14978 699 aaKnown RBP eCLIP4.17□□□□□ -1.741e-9■■□□□ 12.3
LINC01578-202ENST00000554133 CCDC157Q569K6 752 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 FAM83BQ5T0W9 1011 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 RNF220Q5VTB9 566 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 CD276Q5ZPR3 534 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 FAM180AQ6UWF9 173 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 ZFPM1Q8IX07 1006 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 CDYL2Q8N8U2 506 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 NRG4Q8WWG1 115 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 GAB3Q8WWW8 586 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 PPM1EQ8WY54 764 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 HDAC10Q969S8 669 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 PWWP2AQ96N64 755 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 ADI1Q9BV57 179 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 MTG2Q9H4K7 406 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 PRDM12Q9H4Q4 367 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 PTPRHQ9HD43 1115 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 DENND2AQ9ULE3 1009 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 LIMCH1Q9UPQ0 1083 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 PCDHGB6Q9Y5F9 930 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 CAPN8A6NHC0 703 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 NPHP1O15259 732 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 NRP2O60462 931 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 MGEA5O60502 916 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 SETSIPP0DME0 302 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 GSPT1P15170 499 aaKnown RBP4.17□□□□□ -1.74
LINC01578-202ENST00000554133 PAX3P23760 479 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 HTR1BP28222 390 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 IL12RB1P42701 662 aa4.17□□□□□ -1.74
LINC01578-202ENST00000554133 FXR1P51114 621 aaKnown RBP eCLIP4.17□□□□□ -1.74
LINC01578-202ENST00000554133 CDR1P51861 262 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms