RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PEX3P56589 373 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 GIT2Q14161 759 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 BTG3Q14201 252 aaPredicted RBP10.3□□□□□ -0.76
CHD8-206ENST00000553870 MCM6Q14566 821 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 AMHR2Q16671 573 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 NAALADL2Q58DX5 795 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 RESP18Q5W5W9 173 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 SHC4Q6S5L8 630 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 APBB1IPQ7Z5R6 666 aaPredicted RBP10.3□□□□□ -0.76
CHD8-206ENST00000553870 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
CHD8-206ENST00000553870 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
CHD8-206ENST00000553870 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 CLP1Q92989 425 aaKnown RBP10.3□□□□□ -0.76
CHD8-206ENST00000553870 CCDC113Q9H0I3 377 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 MAGEF1Q9HAY2 307 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 PARVGQ9HBI0 331 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 KMT5AQ9NQR1 393 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 ARHGAP28Q9P2N2 729 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 PCDHB2Q9Y5E7 798 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 COL4A6Q14031 1691 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 LCHNA4D1U4 455 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 CCDC169A6NNP5 214 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 SFI1A8K8P3 1242 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 N4BP3O15049 544 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 FAM13AO94988 1023 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 PRKCBP05771 671 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 MAPTP10636 758 aaKnown RBP10.29□□□□□ -0.76
CHD8-206ENST00000553870 GAP43P17677 238 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 NCLP19338 710 aaKnown RBP10.29□□□□□ -0.76
CHD8-206ENST00000553870 POU3F3P20264 500 aaPredicted RBP10.29□□□□□ -0.76
CHD8-206ENST00000553870 PRPF4BQ13523 1007 aaKnown RBP10.29□□□□□ -0.76
CHD8-206ENST00000553870 DHX8Q14562 1220 aaKnown RBP10.29□□□□□ -0.76
CHD8-206ENST00000553870 GRIN2CQ14957 1233 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 E2F4Q16254 413 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 ABI1Q8IZP0 508 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 LRRC15Q8TF66 581 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 CDX2Q99626 313 aaPredicted RBP10.29□□□□□ -0.76
CHD8-206ENST00000553870 PLVAPQ9BX97 442 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 PANK2Q9BZ23 570 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 TNMDQ9H2S6 317 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 AAASQ9NRG9 546 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 LMCD1Q9NZU5 365 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 KANSL3Q9P2N6 904 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 SEL1LQ9UBV2 794 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 ADGRA3Q8IWK6 1321 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 CNTNAP2Q9UHC6 1331 aa10.29□□□□□ -0.76
CHD8-206ENST00000553870 FAM237AA0A1B0GTK4 181 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 A0A1W2PQ27 194 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 A0A1W2PQ64 194 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 A0A1W2PQD8 194 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 TBKBP1A7MCY6 615 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 C5orf67F2Z3F1 127 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 TRAK2O60296 914 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 TBCAO75347 108 aaKnown RBP10.28□□□□□ -0.76
CHD8-206ENST00000553870 BMPR1AP36894 532 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 STRN3Q13033 797 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 UBXN11Q5T124 520 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 CNNM4Q6P4Q7 775 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 SLC27A1Q6PCB7 646 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 GLB1LQ6UWU2 654 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 Q7L0L9 218 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 TMEM192Q8IY95 271 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 MYCT1Q8N699 235 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 PDILTQ8N807 584 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 TMEM161BQ8NDZ6 487 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 DDX12PQ92771 950 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 GAS2L1Q99501 681 aaPredicted RBP10.28□□□□□ -0.76
CHD8-206ENST00000553870 REEP2Q9BRK0 252 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 ADPGKQ9BRR6 497 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 MRPL9Q9BYD2 267 aaKnown RBP10.28□□□□□ -0.76
CHD8-206ENST00000553870 MRPL4Q9BYD3 311 aaKnown RBP10.28□□□□□ -0.76
CHD8-206ENST00000553870 TRIM6Q9C030 488 aaPredicted RBP10.28□□□□□ -0.76
CHD8-206ENST00000553870 ST6GALNAC4Q9H4F1 302 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 POLD4Q9HCU8 107 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 KBTBD4Q9NVX7 518 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 KCNH3Q9ULD8 1083 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 TNFSF13BQ9Y275 285 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 MYH15Q9Y2K3 1946 aa10.28□□□□□ -0.76
CHD8-206ENST00000553870 ZMYM2Q9UBW7 1377 aa10.27□□□□□ -0.76
CHD8-206ENST00000553870 PTPRSQ13332 1948 aa10.27□□□□□ -0.76
CHD8-206ENST00000553870 A0A087X0B3 334 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 NPHP3-ACAD11A0A0J9YXS1 232 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 H3BNC9 293 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 INPPL1O15357 1258 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 SLC16A4O15374 487 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 POLR2DO15514 142 aaKnown RBP10.27□□□□□ -0.77
CHD8-206ENST00000553870 OFD1O75665 1012 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 ITGA4P13612 1032 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 ATF7P17544 494 aaPredicted RBP10.27□□□□□ -0.77
CHD8-206ENST00000553870 NCKAP1LP55160 1127 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 RAD51AP2Q09MP3 1159 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 DCAF4L1Q3SXM0 396 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 EPC2Q52LR7 807 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 NT5DC1Q5TFE4 455 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 ZPBP2Q6X784 338 aa10.27□□□□□ -0.77
CHD8-206ENST00000553870 HAUS6Q7Z4H7 955 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms