RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SMG1Q96Q15 3661 aaKnown RBP10.25□□□□□ -0.77
PRKCH-208ENST00000553846 PKD1L2Q7Z442 2459 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 KANSL1LA0AUZ9 987 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 DCDC2BA2VCK2 349 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 PRR5-ARHGAP8B1AHC4 643 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 F8W810 466 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 SGSM2O43147 1006 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 SSBP05455 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
PRKCH-208ENST00000553846 CALM1P0DP23 149 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 CALM2P0DP24 149 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 CALM3P0DP25 149 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 SDHBP21912 280 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 ADCY7P51828 1080 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 ARHGAP8P85298 464 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 DSC1Q08554 894 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 FZD5Q13467 585 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 LONRF3Q496Y0 759 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 UBXN11Q5T124 520 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 LILRA6Q6PI73 481 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 CKAP2LQ8IYA6 745 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 CCDC82Q8N4S0 544 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 GPR161Q8N6U8 529 aaKnown RBP10.25□□□□□ -0.77
PRKCH-208ENST00000553846 HDAC7Q8WUI4 952 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 SMG7Q92540 1137 aaKnown RBP10.25□□□□□ -0.77
PRKCH-208ENST00000553846 FGF14Q92915 247 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 CLDN23Q96B33 292 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 RTKNQ9BST9 563 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 NT5C3AQ9H0P0 336 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 MRPL17Q9NRX2 175 aaKnown RBP10.25□□□□□ -0.77
PRKCH-208ENST00000553846 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 TBC1D22BQ9NU19 505 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 BARHL2Q9NY43 387 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.25□□□□□ -0.77
PRKCH-208ENST00000553846 INPP5FQ9Y2H2 1132 aa10.25□□□□□ -0.77
PRKCH-208ENST00000553846 STK25O00506 426 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 NRP1O14786 923 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 GLUD1P00367 558 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 ADH1AP07327 375 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 PSAPP07602 524 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 TMOD1P28289 359 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 HOXA11P31270 313 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-208ENST00000553846 CIITAP33076 1130 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 RAB27AP51159 221 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 NAPAP54920 295 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 GPC5P78333 572 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 SETQ01105 290 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-208ENST00000553846 DSG1Q02413 1049 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 PARM1Q6UWI2 310 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 B3GNT9Q6UX72 402 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 TRMT1LQ7Z2T5 733 aaKnown RBP10.24□□□□□ -0.77
PRKCH-208ENST00000553846 COLGALT2Q8IYK4 626 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 ST13P5Q8NFI4 369 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-208ENST00000553846 NLRP7Q8WX94 980 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 MBOAT7Q96N66 472 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 ZNF577Q9BSK1 485 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 GBP3Q9H0R5 595 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 IFT122Q9HBG6 1241 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 FAM217BQ9NTX9 383 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-208ENST00000553846 AGPAT5Q9NUQ2 364 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 ZDHHC7Q9NXF8 308 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 NCDNQ9UBB6 729 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 CDV3Q9UKY7 258 aaKnown RBP10.24□□□□□ -0.77
PRKCH-208ENST00000553846 PIN4Q9Y237 131 aaKnown RBP10.24□□□□□ -0.77
PRKCH-208ENST00000553846 PCDHB2Q9Y5E7 798 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 LOC400499M0QZD8 3231 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 DMXL2Q8TDJ6 3036 aa10.24□□□□□ -0.77
PRKCH-208ENST00000553846 NBEAQ8NFP9 2946 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 A0A087WZ62 844 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 TMEM150BA6NC51 233 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 WDR64B1ANS9 1081 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 hCG_1984214I3L0E3 225 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 TGM5O43548 720 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 URODP06132 367 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 SKIP12755 728 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 MCM5P33992 734 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 MLF2Q15773 248 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 TTC22Q5TAA0 569 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 TWF2Q6IBS0 349 aaKnown RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 APOA5Q6Q788 366 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 GET4Q7L5D6 327 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 MICU3Q86XE3 530 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 GPR65Q8IYL9 337 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 ZNF713Q8N859 430 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 TMEM87AQ8NBN3 555 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 FDXACB1Q9BRP7 624 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 GCOM2Q9BZD3 368 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 PRKD2Q9BZL6 878 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 PLEKHA4Q9H4M7 779 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 LTB4R2Q9NPC1 389 aa10.23□□□□□ -0.77
PRKCH-208ENST00000553846 RALYQ9UKM9 306 aaKnown RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 RBM8AQ9Y5S9 174 aaKnown RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 DSPP15924 2871 aaKnown RBP10.23□□□□□ -0.77
PRKCH-208ENST00000553846 LAMA5O15230 3695 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 ITPR1Q14643 2758 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 FREM2Q5SZK8 3169 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms