RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 CSGALNACT2Q8N6G5 542 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 CPB2Q96IY4 423 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 DUSP9Q99956 384 aaKnown RBP15.48■□□□□ 0.07
PRKCH-206ENST00000553830 BPIFA3Q9BQP9 254 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 CELF4Q9BZC1 486 aaKnown RBP15.48■□□□□ 0.07
PRKCH-206ENST00000553830 CCDC113Q9H0I3 377 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 GBP3Q9H0R5 595 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 PCIF1Q9H4Z3 704 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 TMEM134Q9H6X4 195 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 TMEM206Q9H813 350 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 TYW1Q9NV66 732 aaKnown RBP15.48■□□□□ 0.07
PRKCH-206ENST00000553830 ANKFY1Q9P2R3 1169 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 NFE2L3Q9Y4A8 694 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 ALPK3Q96L96 1907 aa15.48■□□□□ 0.07
PRKCH-206ENST00000553830 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 GOLGA6L3A6NEY3 463 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 TTLL13PA6NNM8 815 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 DCDC2CA8MYV0 355 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 TGFB1I1O43294 461 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 ERLIN2O94905 339 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 CHRNA1P02708 482 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 IQCF3P0C7M6 154 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 COL6A1P12109 1028 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 DARSP14868 501 aaKnown RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 TLE2Q04725 743 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 PRPF4BQ13523 1007 aaKnown RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 SNX17Q15036 470 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 LRRC26Q2I0M4 334 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 TRIM71Q2Q1W2 868 aaKnown RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 ZNF618Q5T7W0 954 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 SPATA1Q5VX52 437 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 CENPPQ6IPU0 288 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 ARMCX5Q6P1M9 558 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 SRGAP1Q7Z6B7 1085 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 ZBTB33Q86T24 672 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 CDR2LQ86X02 465 aaPredicted RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 ENOX1Q8TC92 643 aaKnown RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 TMEM40Q8WWA1 233 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 SRRTQ9BXP5 876 aaKnown RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 MRPL4Q9BYD3 311 aaKnown RBP15.47■□□□□ 0.07
PRKCH-206ENST00000553830 AGPAT3Q9NRZ7 376 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 FANCLQ9NW38 375 aa15.47■□□□□ 0.07
PRKCH-206ENST00000553830 PDXKO00764 312 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 NR3C1P04150 777 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 CKBP12277 381 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 CRYBB1P53674 252 aaPredicted RBP15.46■□□□□ 0.07
PRKCH-206ENST00000553830 TPM4P67936 248 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 CDC42EP1Q00587 391 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 PLCB2Q00722 1185 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 LRRC63Q05C16 580 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 GSE1Q14687 1217 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 NCAPHQ15003 741 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 CT47A1Q5JQC4 288 aaPredicted RBP15.46■□□□□ 0.07
PRKCH-206ENST00000553830 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 SLC39A4Q6P5W5 647 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 POMGNT1Q8WZA1 660 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 ZBTB45Q96K62 511 aaPredicted RBP15.46■□□□□ 0.07
PRKCH-206ENST00000553830 CBWD1Q9BRT8 395 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 TCHPQ9BT92 498 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 SEZ6LQ9BYH1 1024 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 PPP1R12CQ9BZL4 782 aa15.46■□□□□ 0.07
PRKCH-206ENST00000553830 SAMSN1Q9NSI8 373 aaKnown RBP15.46■□□□□ 0.07
PRKCH-206ENST00000553830 PRMT7Q9NVM4 692 aaPredicted RBP15.46■□□□□ 0.07
PRKCH-206ENST00000553830 NOC2LQ9Y3T9 749 aaKnown RBP15.46■□□□□ 0.07
PRKCH-206ENST00000553830 TANC1Q9C0D5 1861 aa15.46■□□□□ 0.06
PRKCH-206ENST00000553830 GOLGA8IPA6NC78 632 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 GOLGA8JA6NMD2 632 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 CD4P01730 458 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 GHRP10912 638 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 SFPQP23246 707 aaKnown RBP eCLIP15.45■□□□□ 0.06
PRKCH-206ENST00000553830 EIF4BP23588 611 aaKnown RBP15.45■□□□□ 0.06
PRKCH-206ENST00000553830 NR2F2P24468 414 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 ABCD1P33897 745 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 POU5F1BQ06416 359 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 MGAT3Q09327 533 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 ZCWPW2Q504Y3 356 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 ATF7IP2Q5U623 682 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
PRKCH-206ENST00000553830 CCDC155Q8N6L0 562 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 SAAL1Q96ER3 474 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 NFKBIZQ9BYH8 718 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 FZD8Q9H461 694 aa15.45■□□□□ 0.06
PRKCH-206ENST00000553830 PRDM5Q9NQX1 630 aaPredicted RBP15.45■□□□□ 0.06
PRKCH-206ENST00000553830 UMODL1Q5DID0 1318 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 ACKR2O00590 384 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 IKBKBO14920 756 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 TSPAN1O60635 241 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 RPS6KA5O75582 802 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 RPLP2P05387 115 aaKnown RBP15.44■□□□□ 0.06
PRKCH-206ENST00000553830 CDK11BP21127 795 aaKnown RBP15.44■□□□□ 0.06
PRKCH-206ENST00000553830 IBSPP21815 317 aaPredicted RBP15.44■□□□□ 0.06
PRKCH-206ENST00000553830 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
PRKCH-206ENST00000553830 ADAM9Q13443 819 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 BFSP2Q13515 415 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 ZNF568Q3ZCX4 644 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 CCDC40Q4G0X9 1142 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 EEF1DP3Q658K8 133 aa15.44■□□□□ 0.06
PRKCH-206ENST00000553830 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms