RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 TCEAL5Q5H9L2 206 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 FAM173BQ6P4H8 233 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 KCNT2Q6UVM3 1135 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 THNSL1Q8IYQ7 743 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 CNNM3Q8NE01 707 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 CCDC51Q96ER9 411 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 IFT74Q96LB3 600 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 CSRNP2Q9H175 543 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 C2orf40Q9H1Z8 148 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 FZD8Q9H461 694 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 ZSCAN16Q9H4T2 348 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 C5orf42Q9H799 3197 aa11.29□□□□□ -0.6
HNRNPC-208ENST00000553753 DLL1O00548 723 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 B4GALT5O43286 388 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 CSPG5O95196 566 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 ALDH7A1P49419 539 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 MAPK6Q16659 721 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 NOMO2Q5JPE7 1267 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 RINT1Q6NUQ1 792 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 AGMOQ6ZNB7 445 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 CABP7Q86V35 215 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 DEPTORQ8TB45 409 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PNMA5Q96PV4 448 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PLIN2Q99541 437 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 EIF2AQ9BY44 585 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 TRIM6Q9C030 488 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 RSAD1Q9HA92 442 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 UBN1Q9NPG3 1134 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 INPP5FQ9Y2H2 1132 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 IPPQ9Y573 584 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 CLIC4Q9Y696 253 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 CNTNAP2Q9UHC6 1331 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 SLC26A4O43511 780 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PPM1AP35813 382 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PBX3P40426 434 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PLCB3Q01970 1234 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 KRT17Q04695 432 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 GRIN1Q05586 938 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 RNASELQ05823 741 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PTPAQ15257 358 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 SYT2Q8N9I0 419 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 CALML4Q96GE6 196 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 DRC1Q96MC2 740 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 RUSC1Q9BVN2 902 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 TLR9Q9NR96 1032 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 TBC1D13Q9NVG8 400 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 HES2Q9Y543 173 aa11.28□□□□□ -0.6
HNRNPC-208ENST00000553753 ACKR2O00590 384 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 NCK2O43639 380 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 HIP1RO75146 1068 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 ZC3H11AO75152 810 aaKnown RBP eCLIP11.27□□□□□ -0.615e-13■■□□□ 12.3
HNRNPC-208ENST00000553753 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 ITGA4P13612 1032 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 PDIA4P13667 645 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 GUCY2CP25092 1073 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 IRS1P35568 1242 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 AFF1P51825 1210 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 EFNA5P52803 228 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 SLC12A3P55017 1021 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 BCAR1P56945 870 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 CEBPZQ03701 1054 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 PRPF4BQ13523 1007 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 TMEM119Q4V9L6 283 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 CDR2LQ86X02 465 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 DAW1Q8N136 415 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 URGCPQ8TCY9 931 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 PPP2R3CQ969Q6 453 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 KIFC3Q9BVG8 833 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 TIPINQ9BVW5 301 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 CCDC113Q9H0I3 377 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 UBE2ZQ9H832 354 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 SPG21Q9NZD8 308 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 KCND2Q9NZV8 630 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 KANSL3Q9P2N6 904 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 LZTS1Q9Y250 596 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 NCOR1O75376 2440 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 PLXNA4Q9HCM2 1894 aa11.27□□□□□ -0.61
HNRNPC-208ENST00000553753 CARNS1A5YM72 827 aa11.26□□□□□ -0.61
HNRNPC-208ENST00000553753 CCDC169A6NNP5 214 aa11.26□□□□□ -0.61
HNRNPC-208ENST00000553753 NT5C1B-RDH14C9J2C7 533 aa11.26□□□□□ -0.61
HNRNPC-208ENST00000553753 K7ERI5 159 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms