RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NGRNQ9NPE2 291 aaKnown RBP4.82□□□□□ -1.64
TDP1-207ENST00000553617 DLL4Q9NR61 685 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 RBM12Q9NTZ6 932 aaKnown RBP4.82□□□□□ -1.64
TDP1-207ENST00000553617 PCDHB1Q9Y5F3 818 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 FRS3O43559 492 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 SGTAO43765 313 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 IL18BPO95998 194 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 C8BP07358 591 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 TYRP1P17643 537 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 RAB1AP62820 205 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 NKX3-2P78367 333 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 GPSM2P81274 684 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 CHAF1AQ13111 956 aaPredicted RBP4.81□□□□□ -1.64
TDP1-207ENST00000553617 STK3Q13188 491 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 IFIT5Q13325 482 aaKnown RBP4.81□□□□□ -1.64
TDP1-207ENST00000553617 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 POLD3Q15054 466 aaPredicted RBP4.81□□□□□ -1.64
TDP1-207ENST00000553617 PLCL1Q15111 1095 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 SKIDA1Q1XH10 827 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 ADGRF1Q5T601 910 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 C1orf228Q6PIY5 440 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 APOA5Q6Q788 366 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 MIGA2Q7L4E1 593 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 GLB1L2Q8IW92 636 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 BCL6BQ8N143 479 aaPredicted RBP4.81□□□□□ -1.64
TDP1-207ENST00000553617 FAM26EQ8N5C1 309 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 FLAD1Q8NFF5 587 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 ABHD4Q8TB40 342 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 PPM1EQ8WY54 764 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 ALG3Q92685 438 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 RGMAQ96B86 450 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 PAWRQ96IZ0 340 aaKnown RBP4.81□□□□□ -1.64
TDP1-207ENST00000553617 CCDC138Q96M89 665 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 TBCBQ99426 244 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 BTBD1Q9H0C5 482 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 NUP62CLQ9H1M0 184 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 PRDM16Q9HAZ2 1276 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 ATP6V0A4Q9HBG4 840 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 KMT5AQ9NQR1 393 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 ANGEL1Q9UNK9 670 aaKnown RBP4.81□□□□□ -1.64
TDP1-207ENST00000553617 NR2E3Q9Y5X4 410 aa4.81□□□□□ -1.64
TDP1-207ENST00000553617 FAM171A2A8MVW0 826 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 FTLP02792 175 aaPredicted RBP4.8□□□□□ -1.64
TDP1-207ENST00000553617 MYF5P13349 255 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 GSPT1P15170 499 aaKnown RBP4.8□□□□□ -1.64
TDP1-207ENST00000553617 PIK3CBP42338 1070 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 PRIM2P49643 509 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 CASP5P51878 434 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 HK3P52790 923 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 NRG3P56975 720 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 ANTXR2P58335 489 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 MEF2AQ02078 507 aaPredicted RBP4.8□□□□□ -1.64
TDP1-207ENST00000553617 TMEM62Q0P6H9 643 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 DGKDQ16760 1214 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 ZNF792Q3KQV3 632 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 THEMIS2Q5TEJ8 643 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 PPP4R3AQ6IN85 833 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 TMC5Q6UXY8 1006 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 CXXC5Q7LFL8 322 aaKnown RBP4.8□□□□□ -1.64
TDP1-207ENST00000553617 DAAM2Q86T65 1068 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 TTC7BQ86TV6 843 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 OR2C3Q8N628 320 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 AGBL5Q8NDL9 886 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.8□□□□□ -1.64
TDP1-207ENST00000553617 DEPTORQ8TB45 409 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 CDK5RAP3Q96JB5 506 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 DMRTA2Q96SC8 542 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 MAF1Q9H063 256 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 GOLGA2P5Q9HBQ8 144 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 DCP1AQ9NPI6 582 aaPredicted RBP4.8□□□□□ -1.64
TDP1-207ENST00000553617 KCND1Q9NSA2 647 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 TRMT13Q9NUP7 481 aaKnown RBP4.8□□□□□ -1.64
TDP1-207ENST00000553617 RTEL1Q9NZ71 1219 aa4.8□□□□□ -1.64
TDP1-207ENST00000553617 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.8□□□□□ -1.64
TDP1-207ENST00000553617 A0A1W2PR48 441 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 OR14I1A6ND48 311 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 BTBD11A6QL63 1104 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 HRKO00198 91 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 ABLIM1O14639 778 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 PIP5K1CO60331 668 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 MGEA5O60502 916 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 XPAP23025 273 aaPredicted RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 SLC6A9P48067 706 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 NKX6-1P78426 367 aaPredicted RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 CD83Q01151 205 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 CACNB2Q08289 660 aaPredicted RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 MGAT5Q09328 741 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 NOGQ13253 232 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 GJC2Q5T442 439 aaPredicted RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 ANO1Q5XXA6 986 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 LMBR1LQ6UX01 489 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 ZC3H18Q86VM9 953 aaKnown RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 SKAP1Q86WV1 359 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 GPR156Q8NFN8 814 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 MYRIPQ8NFW9 859 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 ANKS1AQ92625 1134 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 PHKBQ93100 1093 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 APIPQ96GX9 242 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms