RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 URGCPQ8TCY9 931 aa14.38□□□□□ -0.11
ACTN1-207ENST00000553290 CDCA3Q99618 268 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-207ENST00000553290 TBC1D13Q9NVG8 400 aa14.38□□□□□ -0.11
ACTN1-207ENST00000553290 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
ACTN1-207ENST00000553290 PRKAG3Q9UGI9 489 aa14.38□□□□□ -0.11
ACTN1-207ENST00000553290 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-207ENST00000553290 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
ACTN1-207ENST00000553290 ARHGEF35A5YM69 484 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 MEIS3P2A8K0S8 358 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 H3BQV1 296 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 LINC01565O15544 149 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 ZC3H11AO75152 810 aaKnown RBP eCLIP14.37□□□□□ -0.11
ACTN1-207ENST00000553290 TBX10O75333 385 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 NCLP19338 710 aaKnown RBP14.37□□□□□ -0.11
ACTN1-207ENST00000553290 PRPHP41219 470 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 RNASELQ05823 741 aaKnown RBP14.37□□□□□ -0.11
ACTN1-207ENST00000553290 MBTD1Q05BQ5 628 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 BMS1Q14692 1282 aaKnown RBP14.37□□□□□ -0.11
ACTN1-207ENST00000553290 RILPL1Q5EBL4 403 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 UBXN11Q5T124 520 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 PADI6Q6TGC4 694 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 IGSF22Q8N9C0 903 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 TMEM169Q96HH4 297 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 TCF25Q9BQ70 676 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 CSRNP2Q9H175 543 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 RSAD1Q9HA92 442 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 UBN1Q9NPG3 1134 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 CD207Q9UJ71 328 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 SMC3Q9UQE7 1217 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 PCDHGC5Q9Y5F6 944 aa14.37□□□□□ -0.11
ACTN1-207ENST00000553290 LRRIQ4A6NIV6 560 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 MBTPS2O43462 519 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 ITGA4P13612 1032 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 CYP11B2P19099 503 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 SMAD4Q13485 552 aaKnown RBP14.36□□□□□ -0.11
ACTN1-207ENST00000553290 DUSP6Q16828 381 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 PLPP4Q5VZY2 271 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 DTHD1Q6ZMT9 781 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 MAEAQ7L5Y9 396 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 TMC7Q7Z402 723 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 CPB2Q96IY4 423 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 MSLNLQ96KJ4 702 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 NRDE2Q9H7Z3 1164 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 GPRC5CQ9NQ84 441 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.36□□□□□ -0.11
ACTN1-207ENST00000553290 IPPQ9Y573 584 aa14.36□□□□□ -0.11
ACTN1-207ENST00000553290 NT5C1B-RDH14C9J2C7 533 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 PER2O15055 1255 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 EYA4O95677 639 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 GALTP07902 379 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 SRGAP2BP0DMP2 458 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 ARF4P18085 180 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 COASYQ13057 564 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 SMC1AQ14683 1233 aaKnown RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 SMAD2Q15796 467 aaKnown RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 CLUL1Q15846 466 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 AMHR2Q16671 573 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 KRT79Q5XKE5 535 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 CDCA2Q69YH5 1023 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 ZBTB8OSQ8IWT0 167 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 HACE1Q8IYU2 909 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 GJD3Q8N144 294 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 SNX29Q8TEQ0 813 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 PRIMPOLQ96LW4 560 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 FAM193BQ96PV7 902 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 TRIM6Q9C030 488 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 C2orf40Q9H1Z8 148 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 PRMT7Q9NVM4 692 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-207ENST00000553290 CLEC1BQ9P126 229 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 STK39Q9UEW8 545 aa14.35□□□□□ -0.11
ACTN1-207ENST00000553290 A0A1B0GUA9 196 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 GLP2RO95838 553 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 SSTR3P32745 418 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 PPP2R5AQ15172 486 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 ECM1Q16610 540 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 FAM187BQ17R55 369 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 SLC27A1Q6PCB7 646 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 TMEM184AQ6ZMB5 413 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 DDX53Q86TM3 631 aaKnown RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 ADHFE1Q8IWW8 467 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 MRPL43Q8N983 215 aaKnown RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 SMRP1Q8NCR6 262 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 IGSF21Q96ID5 467 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 TMEM175Q9BSA9 504 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 C1QTNF1Q9BXJ1 281 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 EIF2AQ9BY44 585 aaKnown RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 GBP3Q9H0R5 595 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 BHMT2Q9H2M3 363 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 CD320Q9NPF0 282 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 DDX19AQ9NUU7 478 aaKnown RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 DAXXQ9UER7 740 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-207ENST00000553290 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 DNM3Q9UQ16 869 aa14.34□□□□□ -0.11
ACTN1-207ENST00000553290 C5orf42Q9H799 3197 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms