RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 CEP89Q96ST8 783 aa14.57□□□□□ -0.08
VPS29-211ENST00000553128 HERC2P3Q9BVR0 1158 aa14.57□□□□□ -0.08
VPS29-211ENST00000553128 RHOBTB2Q9BYZ6 727 aa14.57□□□□□ -0.08
VPS29-211ENST00000553128 NRBP2Q9NSY0 501 aa14.57□□□□□ -0.08
VPS29-211ENST00000553128 SPATA6Q9NWH7 488 aaPredicted RBP14.57□□□□□ -0.08
VPS29-211ENST00000553128 BARHL2Q9NY43 387 aa14.57□□□□□ -0.08
VPS29-211ENST00000553128 TCEAL9Q9UHQ7 104 aa14.57□□□□□ -0.08
VPS29-211ENST00000553128 FAN1Q9Y2M0 1017 aa14.57□□□□□ -0.08
VPS29-211ENST00000553128 PRG3Q9Y2Y8 225 aaPredicted RBP14.57□□□□□ -0.08
VPS29-211ENST00000553128 CARNS1A5YM72 827 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 PAPLNO95428 1278 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 EFEMP2O95967 443 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 GLUD1P00367 558 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 ALDH2P05091 517 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 URODP06132 367 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 ADH1AP07327 375 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 ZNF528Q3MIS6 628 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 PRR16Q569H4 304 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 KIAA0319Q5VV43 1072 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 PARM1Q6UWI2 310 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 PALB2Q86YC2 1186 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 RNF168Q8IYW5 571 aaPredicted RBP14.56□□□□□ -0.08
VPS29-211ENST00000553128 RSPH1Q8WYR4 309 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 B3GALT6Q96L58 329 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 NT5C3AQ9H0P0 336 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 PARD6AQ9NPB6 346 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 DISC1Q9NRI5 854 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 CDV3Q9UKY7 258 aaKnown RBP14.56□□□□□ -0.08
VPS29-211ENST00000553128 SMG5Q9UPR3 1016 aaKnown RBP14.56□□□□□ -0.08
VPS29-211ENST00000553128 PCDHB2Q9Y5E7 798 aa14.56□□□□□ -0.08
VPS29-211ENST00000553128 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 IGKV6-21A0A0C4DH24 114 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 KANSL1LA0AUZ9 987 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 WDR64B1ANS9 1081 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 SPTLC1O15269 473 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 LAMTOR5O43504 91 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 CHMP2AO43633 222 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 EDIL3O43854 480 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 STBD1O95210 358 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 SKIP12755 728 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 CD72P21854 359 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 SFPQP23246 707 aaKnown RBP eCLIP14.55□□□□□ -0.08
VPS29-211ENST00000553128 SETQ01105 290 aaPredicted RBP14.55□□□□□ -0.08
VPS29-211ENST00000553128 MTERF2Q49AM1 385 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 TSSK4Q6SA08 328 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 CYP26C1Q6V0L0 522 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 CATSPER4Q7RTX7 472 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 SGMS1Q86VZ5 419 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 RHPN2Q8IUC4 686 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 GLYCTKQ8IVS8 523 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 URGCPQ8TCY9 931 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 DDX23Q9BUQ8 820 aaKnown RBP14.55□□□□□ -0.08
VPS29-211ENST00000553128 RSAD1Q9HA92 442 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 PIDD1Q9HB75 910 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 RXFP1Q9HBX9 757 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.55□□□□□ -0.08
VPS29-211ENST00000553128 FBXO4Q9UKT5 387 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 PATJQ8NI35 1801 aa14.55□□□□□ -0.08
VPS29-211ENST00000553128 TGM5O43548 720 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 ADRB1P08588 477 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 GLUD2P49448 558 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 RAB27AP51159 221 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 NTHL1P78549 312 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 UBXN2BQ14CS0 331 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 UBXN11Q5T124 520 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 APOA5Q6Q788 366 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 MRPL10Q7Z7H8 261 aaKnown RBP14.54□□□□□ -0.08
VPS29-211ENST00000553128 TEX2Q8IWB9 1127 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 ZBTB44Q8NCP5 570 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 ATRIPQ8WXE1 791 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 NLRP4Q96MN2 994 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 FAM193BQ96PV7 902 aaPredicted RBP14.54□□□□□ -0.08
VPS29-211ENST00000553128 TMEM175Q9BSA9 504 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 EPC1Q9H2F5 836 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 UNC45AQ9H3U1 944 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 FAM217BQ9NTX9 383 aaPredicted RBP14.54□□□□□ -0.08
VPS29-211ENST00000553128 SUCLA2Q9P2R7 463 aaPredicted RBP14.54□□□□□ -0.08
VPS29-211ENST00000553128 STK39Q9UEW8 545 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 SEPT9Q9UHD8 586 aaPredicted RBP14.54□□□□□ -0.08
VPS29-211ENST00000553128 BRPF3Q9ULD4 1205 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 USP18Q9UMW8 372 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 PCDHGA2Q9Y5H1 932 aa14.54□□□□□ -0.08
VPS29-211ENST00000553128 FAM170BA6NMN3 283 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 PRR5-ARHGAP8B1AHC4 643 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 SLC27A2O14975 620 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 MSH4O15457 936 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 GAS2O43903 313 aaKnown RBP14.53□□□□□ -0.08
VPS29-211ENST00000553128 LILRB5O75023 590 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 RPL17P18621 184 aaKnown RBP14.53□□□□□ -0.08
VPS29-211ENST00000553128 SDHBP21912 280 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 OR1G1P47890 313 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 ARHGAP8P85298 464 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 DSG1Q02413 1049 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 LMNB2Q03252 620 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 MLF2Q15773 248 aaPredicted RBP14.53□□□□□ -0.08
VPS29-211ENST00000553128 RTN1Q16799 776 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 COLGALT2Q8IYK4 626 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 EXOC6Q8TAG9 804 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 NELL1Q92832 810 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms