RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 MAPK6Q16659 721 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ARSHQ5FYA8 562 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 Q7L0L9 218 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ECHDC2Q86YB7 292 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 CMTR2Q8IYT2 770 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 SPIRE2Q8WWL2 714 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 RSPH1Q8WYR4 309 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 KIFC3Q9BVG8 833 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 FZD8Q9H461 694 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 CUEDC2Q9H467 287 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 MAGEF1Q9HAY2 307 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ARHGAP28Q9P2N2 729 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 KCNG1Q9UIX4 513 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 ANK1P16157 1881 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 REV3LO60673 3130 aa12.93□□□□□ -0.34
TRAFD1-209ENST00000552896 B4GALT5O43286 388 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 TBCAO75347 108 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 EOMESO95936 686 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 PRKCBP05771 671 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 KRT18P05783 430 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 ARF4P18085 180 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 SCP2P22307 547 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 PEX3P56589 373 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 DHX8Q14562 1220 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 SV2BQ7L1I2 683 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 PDILTQ8N807 584 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 KCNN1Q92952 543 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 CHAMP1Q96JM3 812 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 PYM1Q9BRP8 204 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 SEMA6BQ9H3T3 888 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 KMT5AQ9NQR1 393 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 FAM105AQ9NUU6 356 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 MTMR10Q9NXD2 777 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 FAM13BQ9NYF5 915 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 LARSQ9P2J5 1176 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 RBM19Q9Y4C8 960 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 ZMYM2Q9UBW7 1377 aa12.92□□□□□ -0.34
TRAFD1-209ENST00000552896 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 COL6A3P12111 3177 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 NPHP3-ACAD11A0A0J9YXS1 232 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 CCDC169A6NNP5 214 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 H0YCG3 227 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 ACKR2O00590 384 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 N4BP3O15049 544 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 ZNF623O75123 536 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 FAM13AO94988 1023 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 SMTNP53814 917 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 NCKAP1LP55160 1127 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 ERVK-21P61565 698 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 PRPF4BQ13523 1007 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 GIT2Q14161 759 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 BTG3Q14201 252 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 UBXN11Q5T124 520 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 ADALQ6DHV7 355 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 SLC27A1Q6PCB7 646 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 FIBCD1Q8N539 461 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 CLP1Q92989 425 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 GUCD1Q96NT3 240 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 NTPCRQ9BSD7 190 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 TMEM117Q9H0C3 514 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 TMEM134Q9H6X4 195 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 PARVGQ9HBI0 331 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 POLD4Q9HCU8 107 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 RWDD3Q9Y3V2 267 aa12.91□□□□□ -0.34
TRAFD1-209ENST00000552896 A0A1B0GUA9 196 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 SLC16A4O15374 487 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 EDN1P05305 212 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 LINC00271P0C7V0 271 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 FGFR1P11362 822 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 CMA1P23946 247 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 ABCD1P33897 745 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 CLLU1OSQ5K130 101 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 ABI1Q8IZP0 508 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 LRRC43Q8N309 656 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 SLC17A8Q8NDX2 589 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 CNNM3Q8NE01 707 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 DDX12PQ92771 950 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 DHX58Q96C10 678 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 PGBD4Q96DM1 585 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 PDZD7Q9H5P4 517 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 SEL1LQ9UBV2 794 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-209ENST00000552896 A0A1W2PQ27 194 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 A0A1W2PQ64 194 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 A0A1W2PQD8 194 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 MYMKA6NI61 221 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms