RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 PYM1Q9BRP8 204 aaKnown RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 TRAIPQ9BWF2 469 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 LRRC27Q9C0I9 530 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 MINDY3Q9H8M7 445 aa11.73□□□□□ -0.53
PTCH1-225ENST00000551845 PRMT7Q9NVM4 692 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 CIZ1Q9ULV3 898 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
PTCH1-225ENST00000551845 FAM86C2PA6NEL3 165 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 RFXAPO00287 272 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 DGKIO75912 1065 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 CA3P07451 260 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 PLS3P13797 630 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-225ENST00000551845 AMPD3Q01432 767 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 MBTD1Q05BQ5 628 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 GIT2Q14161 759 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 LINC01599Q8WXQ3 324 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 PRIMPOLQ96LW4 560 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 FZD8Q9H461 694 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 AGPAT5Q9NUQ2 364 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 TMEM161AQ9NX61 479 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 ODF2LQ9ULJ1 636 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 COG5Q9UP83 839 aa11.72□□□□□ -0.53
PTCH1-225ENST00000551845 MYH9P35579 1960 aaKnown RBP11.72□□□□□ -0.53
PTCH1-225ENST00000551845 PHLPP2Q6ZVD8 1323 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 NPHP3-ACAD11A0A0J9YXS1 232 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 H0YCG3 227 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 ACKR2O00590 384 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 HOXA2O43364 376 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 GPR37L1O60883 481 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 ZNF623O75123 536 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 FAM13AO94988 1023 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 LIG1P18858 919 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CMA1P23946 247 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 NPTX2P47972 431 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 RAB27AP51159 221 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 BTG3Q14201 252 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-225ENST00000551845 FAM187BQ17R55 369 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 NAALADL2Q58DX5 795 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-225ENST00000551845 NOTUMQ6P988 496 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 ECHDC2Q86YB7 292 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 DAW1Q8N136 415 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 FIBCD1Q8N539 461 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 MYCT1Q8N699 235 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CNNM3Q8NE01 707 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 LRRC15Q8TF66 581 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 PGBD4Q96DM1 585 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CHAMP1Q96JM3 812 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 ZHX3Q9H4I2 956 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CERS4Q9HA82 394 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 FAM105AQ9NUU6 356 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 SSUH2Q9Y2M2 353 aa11.71□□□□□ -0.53
PTCH1-225ENST00000551845 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 GOLGA6L4A6NEF3 574 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 POLR2DO15514 142 aaKnown RBP11.7□□□□□ -0.54
PTCH1-225ENST00000551845 TRAK2O60296 914 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 TSPAN1O60635 241 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 TBCAO75347 108 aaKnown RBP11.7□□□□□ -0.54
PTCH1-225ENST00000551845 ARF4P18085 180 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-225ENST00000551845 MAPK7Q13164 816 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 PRPF4BQ13523 1007 aaKnown RBP11.7□□□□□ -0.54
PTCH1-225ENST00000551845 DYMQ7RTS9 669 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 ABI1Q8IZP0 508 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 RNF169Q8NCN4 708 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 DDX12PQ92771 950 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 DHX58Q96C10 678 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 ZNF689Q96CS4 500 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-225ENST00000551845 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 CPB2Q96IY4 423 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 REEP2Q9BRK0 252 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 PARVGQ9HBI0 331 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 KCNH3Q9ULD8 1083 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 MTCH2Q9Y6C9 303 aa11.7□□□□□ -0.54
PTCH1-225ENST00000551845 A0A087X0B3 334 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 LINC01553A4QN01 128 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 SLC16A4O15374 487 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 PRKCBP05771 671 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 SCP2P22307 547 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 ABCD1P33897 745 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 TAP1Q03518 808 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 STRN3Q13033 797 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 AMHR2Q16671 573 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 MRPL10Q7Z7H8 261 aaKnown RBP11.69□□□□□ -0.54
PTCH1-225ENST00000551845 CMTR2Q8IYT2 770 aaKnown RBP11.69□□□□□ -0.54
PTCH1-225ENST00000551845 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms