RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 NR2F2P24468 414 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 GJA8P48165 433 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 LIG4P49917 911 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 CRYBB1P53674 252 aaPredicted RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 PMS1P54277 932 aaKnown RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 NLRP11P59045 1033 aaKnown RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 PTGISQ16647 500 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 GDF6Q6KF10 455 aaPredicted RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 APBB1IPQ7Z5R6 666 aaPredicted RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 MED15Q96RN5 788 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 MKNK1Q9BUB5 465 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 TMEM106CQ9BVX2 250 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 CCDC113Q9H0I3 377 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 FAM49AQ9H0Q0 323 aaPredicted RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 FZD8Q9H461 694 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 IFT122Q9HBG6 1241 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 METTL14Q9HCE5 456 aaKnown RBP11.4□□□□□ -0.58
NEK3-203ENST00000551355 KIAA1586Q9HCI6 787 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 AGPAT3Q9NRZ7 376 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 FRMD4BQ9Y2L6 1034 aa11.4□□□□□ -0.58
NEK3-203ENST00000551355 GRIN2DO15399 1336 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 ADGRA3Q8IWK6 1321 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 A0A087WZ62 844 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 TRIM49BA6NDI0 452 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 LRRC10BA6NIK2 292 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 INO80B-WBP1J3KQ70 363 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 MAPK13O15264 365 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 GPR32O75388 356 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 LDHAP00338 332 aaKnown RBP11.39□□□□□ -0.59
NEK3-203ENST00000551355 VTNP04004 478 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 PRKCBP05771 671 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 EPB41P11171 864 aaKnown RBP11.39□□□□□ -0.59
NEK3-203ENST00000551355 PSMC2P35998 433 aaKnown RBP11.39□□□□□ -0.59
NEK3-203ENST00000551355 MARSP56192 900 aaKnown RBP11.39□□□□□ -0.59
NEK3-203ENST00000551355 PPP2R3AQ06190 1150 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 KCNA1Q09470 495 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 FILIP1LQ4L180 1135 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 TCP11X2Q5H9J9 407 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 ARMCX5Q6P1M9 558 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 RUFY4Q6ZNE9 571 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 USP37Q86T82 979 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 KSR1Q8IVT5 923 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 DNAJB3Q8WWF6 145 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 FDXACB1Q9BRP7 624 aaPredicted RBP11.39□□□□□ -0.59
NEK3-203ENST00000551355 ADAMTS10Q9H324 1103 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 DMAC2Q9NW81 257 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 STYXL1Q9Y6J8 313 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 ZMYM2Q9UBW7 1377 aa11.39□□□□□ -0.59
NEK3-203ENST00000551355 ARID2Q68CP9 1835 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 KCNJ18B7U540 433 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 TOM1L1O75674 476 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 ERLIN2O94905 339 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 SERPINC1P01008 464 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 DARSP14868 501 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEK3-203ENST00000551355 EIF4BP23588 611 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 AXLP30530 894 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 CDK7P50613 346 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 MRPS6P82932 125 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 ZNF200P98182 395 aaPredicted RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 MBTD1Q05BQ5 628 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 ENPEPQ07075 957 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 PRPF4BQ13523 1007 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 KCNJ12Q14500 433 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 HIC1Q14526 733 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 KYAT1Q16773 422 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 C1orf53Q5VUE5 145 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 LRRC55Q6ZSA7 311 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 TSHZ1Q6ZSZ6 1077 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 TAS1R3Q7RTX0 852 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 USP38Q8NB14 1042 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 XXYLT1Q8NBI6 393 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 ZBTB10Q96DT7 871 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 CELF4Q9BZC1 486 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 HSD3B7Q9H2F3 369 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 SAMSN1Q9NSI8 373 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
NEK3-203ENST00000551355 SQORQ9Y6N5 450 aa11.38□□□□□ -0.59
NEK3-203ENST00000551355 CNTNAP2Q9UHC6 1331 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 CLDN3O15551 220 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 EXOC3O60645 756 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 MYCP01106 439 aaPredicted RBP11.37□□□□□ -0.59
NEK3-203ENST00000551355 FANCCQ00597 558 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
NEK3-203ENST00000551355 TMEM132AQ24JP5 1023 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 KIZQ2M2Z5 673 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 CCDC40Q4G0X9 1142 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 CAGE1Q8TC20 777 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 POMGNT1Q8WZA1 660 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 CNOT6LQ96LI5 555 aaKnown RBP11.37□□□□□ -0.59
NEK3-203ENST00000551355 TOX2Q96NM4 488 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 ACO2Q99798 780 aaKnown RBP11.37□□□□□ -0.59
NEK3-203ENST00000551355 TRIM5Q9C035 493 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 ARMCX3Q9UH62 379 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms