RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PALM3A6NDB9 673 aaPredicted RBP15.38■□□□□ 0.05
SNRPF-203ENST00000551316 CAPNS1P04632 268 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 ZNF806P0C7X5 589 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 NRLP54845 237 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 ITGB3BPQ13352 177 aaPredicted RBP15.38■□□□□ 0.05
SNRPF-203ENST00000551316 MTMR1Q13613 665 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 PLPPR4Q7Z2D5 763 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 CCDC60Q8IWA6 550 aaPredicted RBP15.38■□□□□ 0.05
SNRPF-203ENST00000551316 ESR2Q92731 530 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 PHKBQ93100 1093 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 PHF20Q9BVI0 1012 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 HERC2P3Q9BVR0 1158 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 PRKD2Q9BZL6 878 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 CACNA2D2Q9NY47 1150 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 CACNA1EQ15878 2313 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 ZNF462Q96JM2 2506 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 NUP205Q92621 2012 aa15.38■□□□□ 0.05
SNRPF-203ENST00000551316 TGM5O43548 720 aa15.37■□□□□ 0.05
SNRPF-203ENST00000551316 HYAL3O43820 417 aaPredicted RBP15.37■□□□□ 0.05
SNRPF-203ENST00000551316 EFEMP2O95967 443 aa15.37■□□□□ 0.05
SNRPF-203ENST00000551316 CCNE2O96020 404 aa15.37■□□□□ 0.05
SNRPF-203ENST00000551316 PRB1P04280 392 aa15.37■□□□□ 0.05
SNRPF-203ENST00000551316 ADH1AP07327 375 aa15.37■□□□□ 0.05
SNRPF-203ENST00000551316 NLRP11P59045 1033 aaKnown RBP15.37■□□□□ 0.05
SNRPF-203ENST00000551316 RNF168Q8IYW5 571 aaPredicted RBP15.37■□□□□ 0.05
SNRPF-203ENST00000551316 LINC01465Q8N7H1 131 aa15.37■□□□□ 0.05
SNRPF-203ENST00000551316 RIOX1Q9H6W3 641 aa15.37■□□□□ 0.05
SNRPF-203ENST00000551316 KIF26AQ9ULI4 1882 aaPredicted RBP15.37■□□□□ 0.05
SNRPF-203ENST00000551316 ASCC3Q8N3C0 2202 aaKnown RBP15.36■□□□□ 0.05
SNRPF-203ENST00000551316 IGKV6D-21A0A0A0MT36 114 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 OFD1O75665 1012 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 EPN2O95208 641 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 SOD2P04179 222 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 URODP06132 367 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 ZSCAN20P17040 1043 aaPredicted RBP15.36■□□□□ 0.05
SNRPF-203ENST00000551316 RPL17P18621 184 aaKnown RBP15.36■□□□□ 0.05
SNRPF-203ENST00000551316 PHKA2P46019 1235 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 NOMO2Q5JPE7 1267 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 PLA2G2CQ5R387 149 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 SH3PXD2AQ5TCZ1 1133 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 Q6ZS52 159 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 LRRC71Q8N4P6 559 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 ING5Q8WYH8 240 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 GPATCH3Q96I76 525 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 VWA8A3KMH1 1905 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 COL1A2P08123 1366 aa15.36■□□□□ 0.05
SNRPF-203ENST00000551316 CCR3P51677 355 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 PFKPQ01813 784 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 UBE2SQ16763 222 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 RNF43Q68DV7 783 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 FAM43BQ6ZT52 329 aaPredicted RBP15.35■□□□□ 0.05
SNRPF-203ENST00000551316 PROSER1Q86XN7 944 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 NPAS3Q8IXF0 933 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 SMARCC2Q8TAQ2 1214 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 KIF12Q96FN5 646 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 RXFP1Q9HBX9 757 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 SENP2Q9HC62 589 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 RBM12Q9NTZ6 932 aaKnown RBP15.35■□□□□ 0.05
SNRPF-203ENST00000551316 HCFC1R1Q9NWW0 138 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 ZDHHC7Q9NXF8 308 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 PRG3Q9Y2Y8 225 aaPredicted RBP15.35■□□□□ 0.05
SNRPF-203ENST00000551316 APC2O95996 2303 aa15.35■□□□□ 0.05
SNRPF-203ENST00000551316 NRP1O14786 923 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 NCAM2O15394 837 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 HBP1O60381 514 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 FOXD2O60548 495 aaPredicted RBP15.34■□□□□ 0.05
SNRPF-203ENST00000551316 EIF4BP23588 611 aaKnown RBP15.34■□□□□ 0.05
SNRPF-203ENST00000551316 RNASELQ05823 741 aaKnown RBP15.34■□□□□ 0.05
SNRPF-203ENST00000551316 LILRA6Q6PI73 481 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 MAMSTRQ6ZN01 415 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 MTSS1LQ765P7 747 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 TRMT1LQ7Z2T5 733 aaKnown RBP15.34■□□□□ 0.05
SNRPF-203ENST00000551316 KBTBD6Q86V97 674 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 LONP2Q86WA8 852 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 METTL13Q8N6R0 699 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 NELL2Q99435 816 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 LMAN1LQ9HAT1 526 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 JADE2Q9NQC1 790 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 ZSWIM5Q9P217 1185 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 NCANO14594 1321 aa15.34■□□□□ 0.05
SNRPF-203ENST00000551316 PNMA6FA0A0J9YX94 578 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 C4orf47A7E2U8 309 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 DDX39AO00148 427 aaKnown RBP15.33■□□□□ 0.04
SNRPF-203ENST00000551316 ZMYND10O75800 440 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 C1QL1O75973 258 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 ATG7O95352 703 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
SNRPF-203ENST00000551316 GLUD2P49448 558 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 GRM2Q14416 872 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 SEC23AQ15436 765 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 CEP68Q76N32 757 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 IQCA1Q86XH1 822 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 CDHR1Q96JP9 859 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 EDEM2Q9BV94 578 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 KCNH7Q9NS40 1196 aa15.33■□□□□ 0.04
SNRPF-203ENST00000551316 ZFP37Q9Y6Q3 630 aaPredicted RBP15.33■□□□□ 0.04
SNRPF-203ENST00000551316 PIK3CDO00329 1044 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 CHRNB1P11230 501 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 PCP11498 1178 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms