RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 TBC1D13Q9NVG8 400 aa22.57■■□□□ 1.2
SLC48A1-208ENST00000551301 CLEC1BQ9P126 229 aa22.57■■□□□ 1.2
SLC48A1-208ENST00000551301 BARX2Q9UMQ3 279 aaPredicted RBP22.57■■□□□ 1.2
SLC48A1-208ENST00000551301 ARID2Q68CP9 1835 aa22.57■■□□□ 1.2
SLC48A1-208ENST00000551301 OFD1O75665 1012 aa22.56■■□□□ 1.2
SLC48A1-208ENST00000551301 TECP42680 631 aa22.56■■□□□ 1.2
SLC48A1-208ENST00000551301 MRPL10Q7Z7H8 261 aaKnown RBP22.56■■□□□ 1.2
SLC48A1-208ENST00000551301 MCPH1Q8NEM0 835 aa22.56■■□□□ 1.2
SLC48A1-208ENST00000551301 GBP3Q9H0R5 595 aa22.56■■□□□ 1.2
SLC48A1-208ENST00000551301 RSAD1Q9HA92 442 aa22.56■■□□□ 1.2
SLC48A1-208ENST00000551301 XPNPEP1Q9NQW7 623 aa22.56■■□□□ 1.2
SLC48A1-208ENST00000551301 C19orf67A6NJJ6 358 aa22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 WNT7AO00755 349 aa22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 HOXA11P31270 313 aaPredicted RBP22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 GIT2Q14161 759 aa22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 HAUS3Q68CZ6 603 aa22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 POLR3CQ9BUI4 534 aaPredicted RBP22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 RAB34Q9BZG1 259 aa22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 TRIM6Q9C030 488 aaPredicted RBP22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 DBR1Q9UK59 544 aaKnown RBP22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 STK24Q9Y6E0 443 aa22.55■■□□□ 1.2
SLC48A1-208ENST00000551301 NT5C1B-RDH14C9J2C7 533 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 DCXO43602 365 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 USO1O60763 962 aaKnown RBP22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 GPR37L1O60883 481 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 GLP2RO95838 553 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 ITGA4P13612 1032 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 ARL2P36404 184 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 CATSPER3Q86XQ3 398 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 IFNLR1Q8IU57 520 aaPredicted RBP22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 MRPL43Q8N983 215 aaKnown RBP22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 KIF2CQ99661 725 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 NFKBIZQ9BYH8 718 aa22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 POLR3FQ9H1D9 316 aaPredicted RBP22.54■■□□□ 1.2
SLC48A1-208ENST00000551301 HIDE1A8MVS5 230 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 TSPAN1O60635 241 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 CXCL14O95715 111 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 SPATA31C1P0DKV0 1188 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 HOXB8P17481 243 aaPredicted RBP22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 NCLP19338 710 aaKnown RBP22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 RPA1P27694 616 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 CAPSQ13938 189 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 TMEM184AQ6ZMB5 413 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 VPS52Q8N1B4 723 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 CASP10Q92851 521 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 KHSRPQ92945 711 aaKnown RBP eCLIP22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 IGSF21Q96ID5 467 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 LRFN3Q9BTN0 628 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 NRDE2Q9H7Z3 1164 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 HCN4Q9Y3Q4 1203 aa22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 USP15Q9Y4E8 981 aaPredicted RBP22.53■■□□□ 1.2
SLC48A1-208ENST00000551301 ARHGEF35A5YM69 484 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 LRRIQ4A6NIV6 560 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 NR1I2O75469 434 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 ALDH2P05091 517 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 GALTP07902 379 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 MUTP22033 750 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 TPRNQ4KMQ1 711 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 LLGL2Q6P1M3 1020 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 AGMOQ6ZNB7 445 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 DDX53Q86TM3 631 aaKnown RBP22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 ZBTB8OSQ8IWT0 167 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 ASAP3Q8TDY4 903 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 CSRNP2Q9H175 543 aa22.52■■□□□ 1.2
SLC48A1-208ENST00000551301 C2orf71A6NGG8 1288 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 MEIS3P2A8K0S8 358 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 GLRA2P23416 452 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 MBTD1Q05BQ5 628 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 UBXN11Q5T124 520 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 ANKRD54Q6NXT1 300 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 MAEAQ7L5Y9 396 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 TMEM175Q9BSA9 504 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 LRWD1Q9UFC0 647 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 FAN1Q9Y2M0 1017 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 IPPQ9Y573 584 aa22.51■■□□□ 1.19
SLC48A1-208ENST00000551301 A0A087WWV3 80 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 MED24O75448 989 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 U2AF2P26368 475 aaKnown RBP eCLIP22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 TMEM132AQ24JP5 1023 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 CES5AQ6NT32 575 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 POTEGQ6S5H5 508 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 VN1R2Q8NFZ6 395 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 CPB2Q96IY4 423 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 PHF7Q9BWX1 381 aaPredicted RBP22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 C2orf40Q9H1Z8 148 aa22.5■■□□□ 1.19
SLC48A1-208ENST00000551301 FAM86C2PA6NEL3 165 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 LAD1O00515 517 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 POMCP01189 267 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 CTSAP10619 480 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 CCT6AP40227 531 aaKnown RBP22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 SLC11A1P49279 550 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 FXR2P51116 673 aaKnown RBP eCLIP22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 RBM10P98175 930 aaKnown RBP22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 PDIA5Q14554 519 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 PPP2R5AQ15172 486 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 SLC27A1Q6PCB7 646 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 PADI6Q6TGC4 694 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 ZNF280BQ86YH2 543 aa22.49■■□□□ 1.19
SLC48A1-208ENST00000551301 PRIMPOLQ96LW4 560 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms