RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-206	ENST00000550851	FAM71B	Q8TC56	605 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	SMC6	Q96SB8	1091 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	FMO2	Q99518	471 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	PRPSAP2	O60256	369 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	ACSL3	O95573	720 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	GALC	P54803	685 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	SNAPC2	Q13487	334 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	SLC18A3	Q16572	532 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	CRY2	Q49AN0	593 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	C6orf163	Q5TEZ5	329 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	FAM114A2	Q9NRY5	505 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	APEX2	Q9UBZ4	518 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	SLIT3	O75094	1523 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	C6orf222	P0C671	652 aa	Predicted RBP	12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	CROCCP2	Q86T23	111 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	NSMCE1	Q8WV22	266 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	HOMER3	Q9NSC5	361 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	ANAPC5	Q9UJX4	755 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	DUSP10	Q9Y6W6	482 aa		12.5	□□□□□ -0.41
LGR5-206	ENST00000550851	LTN1	O94822	1766 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	ZNF157	P51786	506 aa	Predicted RBP	12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	B4GALNT4	Q76KP1	1039 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	FAM83A	Q86UY5	434 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	AMIGO3	Q86WK7	504 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	RNF10	Q8N5U6	811 aa	Known RBP	12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	PDCD2L	Q9BRP1	358 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	PLCB1	Q9NQ66	1216 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	CTSH	P09668	335 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	GABPA	Q06546	454 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	LGSN	Q5TDP6	509 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	MAP1S	Q66K74	1059 aa	Predicted RBP	12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	PNMA8A	Q86V59	439 aa	Predicted RBP	12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	SIX6OS1	Q8N1H7	587 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	CBWD1	Q9BRT8	395 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	AGPAT3	Q9NRZ7	376 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	MRFAP1	Q9Y605	127 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	GIT2	Q14161	759 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	BBS9	Q3SYG4	887 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	DNAAF5	Q86Y56	855 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	GMCL1P1	Q8NEA9	526 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	SPATA4	Q8NEY3	305 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	KIF12	Q96FN5	646 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	EDEM3	Q9BZQ6	932 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	C2orf40	Q9H1Z8	148 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	USP20	Q9Y2K6	914 aa		12.49	□□□□□ -0.41
LGR5-206	ENST00000550851	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	DARS2	Q6PI48	645 aa	Known RBP	12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	OR6J1	Q8NGC5	347 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	PNMA5	Q96PV4	448 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	CD2AP	Q9Y5K6	639 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	ITIH6	Q6UXX5	1313 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	MCF2L	O15068	1137 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	CSDE1	O75534	798 aa	Known RBP	12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	KLRC1	P26715	233 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	KIAA1841	Q6NSI8	718 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	CBWD2	Q8IUF1	395 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	KIAA0895	Q8NCT3	520 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	SCFD1	Q8WVM8	642 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	CPA5	Q8WXQ8	436 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	ANKS1A	Q92625	1134 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	AGPAT1	Q99943	283 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	AMACR	Q9UHK6	382 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	HEY1	Q9Y5J3	304 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	UBE4B	O95155	1302 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	GOLGA8K	D6RF30	607 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	ATMIN	O43313	823 aa	Predicted RBP	12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	CELF2	O95319	508 aa	Known RBP	12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	ERVK-24	P63145	666 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	DGKZ	Q13574	1117 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851	RFFL	Q8WZ73	363 aa		12.48	□□□□□ -0.41
LGR5-206	ENST00000550851		M0QYV0	167 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	EML1	O00423	815 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	RARB	P10826	455 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	TCF7	P36402	384 aa	Predicted RBP	12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	CCT5	P48643	541 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	PSMC1	P62191	440 aa	Known RBP	12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	VSNL1	P62760	191 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	GIMAP7	Q8NHV1	300 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	NOVA2	Q9UNW9	492 aa	Known RBP	12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	KIF13A	Q9H1H9	1805 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851		A0A087X0T9	212 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	ADM5	C9JUS6	153 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	TADA3	O75528	432 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	AKAP3	O75969	853 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	FAM228B	P0C875	321 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	SCP2	P22307	547 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	ARL4A	P40617	200 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	EFNA5	P52803	228 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	SARNP	P82979	210 aa	Known RBP	12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	APBA1	Q02410	837 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	C2CD6	Q53TS8	623 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	CENPP	Q6IPU0	288 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	METTL23	Q86XA0	190 aa		12.47	□□□□□ -0.41
LGR5-206	ENST00000550851	GLIS3	Q8NEA6	775 aa		12.47	□□□□□ -0.41

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