RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 DDHD2O94830 711 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 DEXIO95424 95 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 GIT2Q14161 759 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 INF2Q27J81 1249 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 ATAT1Q5SQI0 421 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 RUFY3Q7L099 469 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 TMEM87AQ8NBN3 555 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 MINDY3Q9H8M7 445 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 USTQ9Y2C2 406 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 COL4A3BPQ9Y5P4 624 aa14.1□□□□□ -0.15
LETMD1-222ENST00000550274 CARNS1A5YM72 827 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 SSBP05455 408 aaKnown RBP eCLIP14.09□□□□□ -0.15
LETMD1-222ENST00000550274 QARSP47897 775 aaKnown RBP14.09□□□□□ -0.15
LETMD1-222ENST00000550274 NUBP1P53384 320 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 PPP2R5CQ13362 524 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
LETMD1-222ENST00000550274 LETM2Q2VYF4 491 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 UBXN11Q5T124 520 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 CABP7Q86V35 215 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 TMEM143Q96AN5 459 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 IRF2BPLQ9H1B7 796 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 ZSWIM6Q9HCJ5 1215 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
LETMD1-222ENST00000550274 KCNJ14Q9UNX9 436 aa14.09□□□□□ -0.15
LETMD1-222ENST00000550274 DMXL1Q9Y485 3027 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 MYH15Q9Y2K3 1946 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 CPLX1O14810 134 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 LILRB3O75022 631 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 REC8O95072 547 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 CNPP09543 421 aaKnown RBP14.08□□□□□ -0.16
LETMD1-222ENST00000550274 SRGAP2CP0DJJ0 459 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 HOXA11P31270 313 aaPredicted RBP14.08□□□□□ -0.16
LETMD1-222ENST00000550274 CLCN4P51793 760 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 STK3Q13188 491 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 MRPL10Q7Z7H8 261 aaKnown RBP14.08□□□□□ -0.16
LETMD1-222ENST00000550274 GPR149Q86SP6 731 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 PPFIBP1Q86W92 1011 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 URGCPQ8TCY9 931 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 PRPF31Q8WWY3 499 aaKnown RBP14.08□□□□□ -0.16
LETMD1-222ENST00000550274 SLC7A3Q8WY07 619 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 CEP170P1Q96L14 293 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 KLHL5Q96PQ7 755 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 JPH2Q9BR39 696 aaPredicted RBP14.08□□□□□ -0.16
LETMD1-222ENST00000550274 DHX33Q9H6R0 707 aaKnown RBP14.08□□□□□ -0.16
LETMD1-222ENST00000550274 SFXN1Q9H9B4 322 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 RSAD1Q9HA92 442 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 KCNMB3Q9NPA1 279 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 TRIP11Q15643 1979 aa14.08□□□□□ -0.16
LETMD1-222ENST00000550274 PROB1E7EW31 1015 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 DTNBO60941 627 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 POMCP01189 267 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 LAMTOR4Q0VGL1 99 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 CWF19L1Q69YN2 538 aaKnown RBP14.07□□□□□ -0.16
LETMD1-222ENST00000550274 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
LETMD1-222ENST00000550274 GALNT17Q6IS24 598 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 CCDC149Q6ZUS6 474 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 PSPC1Q8WXF1 523 aaKnown RBP14.07□□□□□ -0.16
LETMD1-222ENST00000550274 ZNF274Q96GC6 653 aaPredicted RBP14.07□□□□□ -0.16
LETMD1-222ENST00000550274 GJB4Q9NTQ9 266 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 MARCH5Q9NX47 278 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 CNTNAP2Q9UHC6 1331 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 FANCMQ8IYD8 2048 aa14.07□□□□□ -0.16
LETMD1-222ENST00000550274 VWA8A3KMH1 1905 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 C2CD2LO14523 706 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 NRP1O14786 923 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 ZBTB39O15060 712 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
LETMD1-222ENST00000550274 KLRC2P26717 231 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 SRGAP1Q7Z6B7 1085 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 FAM177A1Q8N128 213 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-222ENST00000550274 SMG8Q8ND04 991 aaKnown RBP14.06□□□□□ -0.16
LETMD1-222ENST00000550274 HAS1Q92839 578 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 SNX27Q96L92 541 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 FAM20AQ96MK3 541 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 FAM193BQ96PV7 902 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-222ENST00000550274 LXNQ9BS40 222 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 TMEM175Q9BSA9 504 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 PHF20Q9BVI0 1012 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 EMILIN2Q9BXX0 1053 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 SLKQ9H2G2 1235 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-222ENST00000550274 RGL1Q9NZL6 768 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 FAN1Q9Y2M0 1017 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 PRG3Q9Y2Y8 225 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-222ENST00000550274 CYP46A1Q9Y6A2 500 aa14.06□□□□□ -0.16
LETMD1-222ENST00000550274 MIA3Q5JRA6 1907 aa14.05□□□□□ -0.16
LETMD1-222ENST00000550274 EP300Q09472 2414 aaPredicted RBP14.05□□□□□ -0.16
LETMD1-222ENST00000550274 CCDC194A0A1B0GVG4 234 aa14.05□□□□□ -0.16
LETMD1-222ENST00000550274 F8W810 466 aa14.05□□□□□ -0.16
LETMD1-222ENST00000550274 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
LETMD1-222ENST00000550274 ALDH2P05091 517 aa14.05□□□□□ -0.16
LETMD1-222ENST00000550274 NCLP19338 710 aaKnown RBP14.05□□□□□ -0.16
LETMD1-222ENST00000550274 YWHABP31946 246 aaKnown RBP14.05□□□□□ -0.16
LETMD1-222ENST00000550274 RFC5P40937 340 aa14.05□□□□□ -0.16
LETMD1-222ENST00000550274 NBL1P41271 181 aa14.05□□□□□ -0.16
LETMD1-222ENST00000550274 CLCN5P51795 746 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms