RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 POMCP01189 267 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 EDN1P05305 212 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 GALTP07902 379 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 SP100P23497 879 aaPredicted RBP17.72■□□□□ 0.43
COX6A1-203ENST00000550009 PTENP60484 403 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 CDC42EP1Q00587 391 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 MBTD1Q05BQ5 628 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 COASYQ13057 564 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 TMC7Q7Z402 723 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 MRPL10Q7Z7H8 261 aaKnown RBP17.72■□□□□ 0.43
COX6A1-203ENST00000550009 LLPHQ9BRT6 129 aaKnown RBP17.72■□□□□ 0.43
COX6A1-203ENST00000550009 INO80BQ9C086 356 aaPredicted RBP17.72■□□□□ 0.43
COX6A1-203ENST00000550009 POLR3FQ9H1D9 316 aaPredicted RBP17.72■□□□□ 0.43
COX6A1-203ENST00000550009 CXCL16Q9H2A7 254 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 ANKEF1Q9NU02 776 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
COX6A1-203ENST00000550009 CACNG4Q9UBN1 327 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 MUTYHQ9UIF7 546 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 LZTS1Q9Y250 596 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 MTCL1Q9Y4B5 1905 aaKnown RBP17.72■□□□□ 0.43
COX6A1-203ENST00000550009 INO80B-WBP1J3KQ70 363 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 WEE2P0C1S8 567 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 CA8P35219 290 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 RBM25P49756 843 aaKnown RBP17.71■□□□□ 0.43
COX6A1-203ENST00000550009 IL17AQ16552 155 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 TTC38Q5R3I4 469 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 VPS52Q8N1B4 723 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 APOL6Q9BWW8 343 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 S1PR5Q9H228 398 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 PCDHB6Q9Y5E3 794 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 DENND4AQ7Z401 1863 aa17.71■□□□□ 0.43
COX6A1-203ENST00000550009 VWA8A3KMH1 1905 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 PP2D1A8MPX8 630 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 CLASP2O75122 1294 aaKnown RBP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 OR52Z1P0C646 297 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 ARF4P18085 180 aaPredicted RBP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 CSPP1Q1MSJ5 1256 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 GLB1LQ6UWU2 654 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 FAM43BQ6ZT52 329 aaPredicted RBP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 TAS1R1Q7RTX1 841 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 C12orf76Q8N812 135 aaPredicted RBP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 MRPL43Q8N983 215 aaKnown RBP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 TCP11Q8WWU5 503 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 RABGGTAQ92696 567 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 IGSF21Q96ID5 467 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 ZFP42Q96MM3 310 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 C1QTNF1Q9BXJ1 281 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 NXF3Q9H4D5 531 aaKnown RBP17.7■□□□□ 0.42
COX6A1-203ENST00000550009 PPME1Q9Y570 386 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 IPPQ9Y573 584 aa17.7■□□□□ 0.42
COX6A1-203ENST00000550009 CXCL14O95715 111 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 SSBP05455 408 aaKnown RBP eCLIP17.69■□□□□ 0.42
COX6A1-203ENST00000550009 AKAP5P24588 427 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 ALDH7A1P49419 539 aaKnown RBP17.69■□□□□ 0.42
COX6A1-203ENST00000550009 RNASELQ05823 741 aaKnown RBP17.69■□□□□ 0.42
COX6A1-203ENST00000550009 ANKRD54Q6NXT1 300 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 SUSD6Q92537 303 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 PPP2R3CQ969Q6 453 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 ZSCAN31Q96LW9 406 aaPredicted RBP17.69■□□□□ 0.42
COX6A1-203ENST00000550009 GAD1Q99259 594 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 MRPL9Q9BYD2 267 aaKnown RBP17.69■□□□□ 0.42
COX6A1-203ENST00000550009 RSAD1Q9HA92 442 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 PRKAG3Q9UGI9 489 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
COX6A1-203ENST00000550009 HCFC2Q9Y5Z7 792 aa17.69■□□□□ 0.42
COX6A1-203ENST00000550009 ZNF318Q5VUA4 2279 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 ASAP2O43150 1006 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 GAS2O43903 313 aaKnown RBP17.68■□□□□ 0.42
COX6A1-203ENST00000550009 GPR37L1O60883 481 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 DGAT1O75907 488 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 ERLIN2O94905 339 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 EPCAMP16422 314 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 NCLP19338 710 aaKnown RBP17.68■□□□□ 0.42
COX6A1-203ENST00000550009 CDC25AP30304 524 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 PPM1AP35813 382 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 MLH1P40692 756 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 KRT17Q04695 432 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
COX6A1-203ENST00000550009 FAM184AQ8NB25 1140 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 RPGRIP1Q96KN7 1286 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 KIFC3Q9BVG8 833 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 SH2B1Q9NRF2 756 aaPredicted RBP17.68■□□□□ 0.42
COX6A1-203ENST00000550009 MARCH5Q9NX47 278 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 KLK14Q9P0G3 267 aa17.68■□□□□ 0.42
COX6A1-203ENST00000550009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.67■□□□□ 0.42
COX6A1-203ENST00000550009 ARL5CA6NH57 179 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 LRRIQ4A6NIV6 560 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 LOC730098B7Z3J9 87 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 NRP1O14786 923 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 DCXO43602 365 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 NPTXRO95502 500 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 MYBP10242 640 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 SKIP12755 728 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 RAB27AP51159 221 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms