RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 COASYQ13057 564 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 PDIA5Q14554 519 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 DUSP6Q16828 381 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 LONRF3Q496Y0 759 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 HAUS3Q68CZ6 603 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 NOTUMQ6P988 496 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 UBN1Q9NPG3 1134 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 ENTPD7Q9NQZ7 604 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 KANSL3Q9P2N6 904 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 PER2O15055 1255 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 TSPAN1O60635 241 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 GLP2RO95838 553 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 NCLP19338 710 aaKnown RBP20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 TOB1P50616 345 aaPredicted RBP20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 RNASELQ05823 741 aaKnown RBP20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 MBTD1Q05BQ5 628 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 CLUL1Q15846 466 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 TMEM184AQ6ZMB5 413 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 TMC7Q7Z402 723 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 ADHFE1Q8IWW8 467 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 SMRP1Q8NCR6 262 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 URGCPQ8TCY9 931 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 TMEM169Q96HH4 297 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 POLR3FQ9H1D9 316 aaPredicted RBP20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 NRDE2Q9H7Z3 1164 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 RSAD1Q9HA92 442 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 INPP5FQ9Y2H2 1132 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 STK24Q9Y6E0 443 aa20.7■□□□□ 0.9
CHMP1A-207ENST00000549328 C19orf67A6NJJ6 358 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 LAD1O00515 517 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 ZC3H11AO75152 810 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■■■■■ 37.4
CHMP1A-207ENST00000549328 GALTP07902 379 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 SSTR3P32745 418 aaPredicted RBP20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 ZP2Q05996 745 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 PTGDRQ13258 359 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 KCNC3Q14003 757 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 BMS1Q14692 1282 aaKnown RBP20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 AMHR2Q16671 573 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 PLPP4Q5VZY2 271 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 POTEGQ6S5H5 508 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 MRPL43Q8N983 215 aaKnown RBP20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 TBC1D32Q96NH3 1257 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 RAB34Q9BZG1 259 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 CSRNP2Q9H175 543 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 EPHX3Q9H6B9 360 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 LRWD1Q9UFC0 647 aa20.69■□□□□ 0.9
CHMP1A-207ENST00000549328 NT5C1B-RDH14C9J2C7 533 aa20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 PI4K2BG5E9Z4 385 aa20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 CYP11B2P19099 503 aa20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 NBR1Q14596 966 aa20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 SMC1AQ14683 1233 aaKnown RBP20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 IGSF22Q8N9C0 903 aa20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 SMG8Q8ND04 991 aaKnown RBP20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 IGSF21Q96ID5 467 aa20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 POP1Q99575 1024 aaKnown RBP20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 PCDHB6Q9Y5E3 794 aa20.68■□□□□ 0.9
CHMP1A-207ENST00000549328 ARHGEF35A5YM69 484 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 HIDE1A8MVS5 230 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 INPPL1O15357 1258 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 CD2BP2O95400 341 aaKnown RBP20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 SRGAP2BP0DMP2 458 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 ITGA4P13612 1032 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 ARF4P18085 180 aaPredicted RBP20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 CCT6AP40227 531 aaKnown RBP20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 PRPHP41219 470 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 PADI6Q6TGC4 694 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 MAEAQ7L5Y9 396 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 DDX53Q86TM3 631 aaKnown RBP20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 VN1R2Q8NFZ6 395 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 KHSRPQ92945 711 aaKnown RBP eCLIP20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 PRIMPOLQ96LW4 560 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 GPRC5CQ9NQ84 441 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 STK39Q9UEW8 545 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 BARX2Q9UMQ3 279 aaPredicted RBP20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 IPPQ9Y573 584 aa20.67■□□□□ 0.9
CHMP1A-207ENST00000549328 A0A1B0GUA9 196 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 LRRIQ4A6NIV6 560 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 ALDH2P05091 517 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 RILPL1Q5EBL4 403 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 PPP4R3CPQ6ZMV5 832 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 ZNF280BQ86YH2 543 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 HACE1Q8IYU2 909 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 VPS52Q8N1B4 723 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 CPB2Q96IY4 423 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 TMEM175Q9BSA9 504 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 EIF2AQ9BY44 585 aaKnown RBP20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 DNAJB4Q9UDY4 337 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 IRAK3Q9Y616 596 aa20.66■□□□□ 0.9
CHMP1A-207ENST00000549328 C2orf71A6NGG8 1288 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 DDHD2O94830 711 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 GJB2P29033 226 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 SLC11A1P49279 550 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 AFF1P51825 1210 aaKnown RBP20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 GIT2Q14161 759 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 ECM1Q16610 540 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 FAM187BQ17R55 369 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 CDCA2Q69YH5 1023 aaPredicted RBP20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 MCTP1Q6DN14 999 aa20.65■□□□□ 0.9
CHMP1A-207ENST00000549328 SLC27A1Q6PCB7 646 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms