RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 RALYQ9UKM9 306 aaKnown RBP13.74□□□□□ -0.21
DDX54-206ENST00000549271 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 COL4A3Q01955 1670 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 CLUHO75153 1309 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 ZZEF1O43149 2961 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 ANHXE9PGG2 379 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 DDX39AO00148 427 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 PAPLNO95428 1278 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 GALTP07902 379 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 CNPP09543 421 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 EIF4BP23588 611 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 KLRC2P26717 231 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 GNA11P29992 359 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 CCT2P78371 535 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 COL9A2Q14055 689 aaPredicted RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 STAMQ92783 540 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 SECISBP2LQ93073 1101 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 PHKBQ93100 1093 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 CHAMP1Q96JM3 812 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 LARP6Q9BRS8 491 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 ZNF577Q9BSK1 485 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 EMILIN2Q9BXX0 1053 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 NRDE2Q9H7Z3 1164 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 CEP131Q9UPN4 1083 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
DDX54-206ENST00000549271 PCDHA10Q9Y5I2 948 aa13.73□□□□□ -0.21
DDX54-206ENST00000549271 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 MAGEB2O15479 319 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 PSAPP07602 524 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 IFNAR1P17181 557 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 NLRP11P59045 1033 aaKnown RBP13.72□□□□□ -0.21
DDX54-206ENST00000549271 HTR4Q13639 388 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 METTL13Q8N6R0 699 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 LINC01465Q8N7H1 131 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 BICD2Q8TD16 824 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 LENG9Q96B70 501 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 ZNF274Q96GC6 653 aaPredicted RBP13.72□□□□□ -0.21
DDX54-206ENST00000549271 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 PARD6AQ9NPB6 346 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 TBC1D13Q9NVG8 400 aa13.72□□□□□ -0.21
DDX54-206ENST00000549271 DOCK6Q96HP0 2047 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 ASPMQ8IZT6 3477 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 LAMTOR5O43504 91 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 SEC24BO95487 1268 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 LAMP2P13473 410 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 CLCN3P51790 818 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 PPM1JQ5JR12 505 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 CKAP2LQ8IYA6 745 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 ATRIPQ8WXE1 791 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 SHDQ96IW2 340 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 DDX23Q9BUQ8 820 aaKnown RBP13.71□□□□□ -0.21
DDX54-206ENST00000549271 TRAIPQ9BWF2 469 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.21
DDX54-206ENST00000549271 BCO2Q9BYV7 579 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 PDRG1Q9NUG6 133 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 SPATA6Q9NWH7 488 aaPredicted RBP13.71□□□□□ -0.21
DDX54-206ENST00000549271 ZSCAN32Q9NX65 697 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 DNAJB4Q9UDY4 337 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 STK39Q9UEW8 545 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
DDX54-206ENST00000549271 ANKRD11Q6UB99 2663 aaPredicted RBP13.71□□□□□ -0.22
DDX54-206ENST00000549271 KANSL1LA0AUZ9 987 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 WDR64B1ANS9 1081 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 INPPL1O15357 1258 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 TBC1D4O60343 1298 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 B4GALT3O60512 393 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 DARSP14868 501 aaKnown RBP13.7□□□□□ -0.22
DDX54-206ENST00000549271 SLC11A1P49279 550 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 USP11P51784 963 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 CSTF1Q05048 431 aaKnown RBP13.7□□□□□ -0.22
DDX54-206ENST00000549271 PRR16Q569H4 304 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 ZNF707Q96C28 371 aaPredicted RBP13.7□□□□□ -0.22
DDX54-206ENST00000549271 RIT2Q99578 217 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 OSBPL6Q9BZF3 934 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.7□□□□□ -0.22
DDX54-206ENST00000549271 GABBR1Q9UBS5 961 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 NUMBLQ9Y6R0 609 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 SPEGQ15772 3267 aa13.7□□□□□ -0.22
DDX54-206ENST00000549271 CNOT1A5YKK6 2376 aaKnown RBP13.69□□□□□ -0.22
DDX54-206ENST00000549271 FASNP49327 2511 aaKnown RBP13.69□□□□□ -0.22
DDX54-206ENST00000549271 PKD1L2Q7Z442 2459 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 CEP295Q9C0D2 2601 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 SLC30A4O14863 429 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 EDIL3O43854 480 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 FGFR4P22455 802 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 TMOD1P28289 359 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 PHKA2P46019 1235 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 GPC3P51654 580 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 ANAPC15P60006 121 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 AKAP17AQ02040 695 aaKnown RBP13.69□□□□□ -0.22
DDX54-206ENST00000549271 SMG7Q92540 1137 aaKnown RBP13.69□□□□□ -0.22
DDX54-206ENST00000549271 LPPQ93052 612 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 MAP7D2Q96T17 732 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms