RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SFI1A8K8P3 1242 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 ZC3H11AO75152 810 aaKnown RBP eCLIP17.44■□□□□ 0.38
DDX54-205ENST00000548786 FGF18O76093 207 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 NPTXRO95502 500 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 LAG3P18627 525 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 IRS1P35568 1242 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 NAMPTP43490 491 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 AFF1P51825 1210 aaKnown RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 RNASELQ05823 741 aaKnown RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 POU5F1BQ06416 359 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 KARSQ15046 597 aaKnown RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 PTPAQ15257 358 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 NOMO2Q5JPE7 1267 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 CDCA2Q69YH5 1023 aaPredicted RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 RINT1Q6NUQ1 792 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 AGMOQ6ZNB7 445 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 SMG8Q8ND04 991 aaKnown RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 SPPL3Q8TCT6 385 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 POF1BQ8WVV4 589 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 KIFAP3Q92845 792 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 P2RX5Q93086 422 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 PGBD4Q96DM1 585 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 CLIC6Q96NY7 704 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 NFKBIZQ9BYH8 718 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 TRIM6Q9C030 488 aaPredicted RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 NT5C3AQ9H0P0 336 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 CSRNP2Q9H175 543 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 NSUN3Q9H649 340 aaKnown RBP17.44■□□□□ 0.38
DDX54-205ENST00000548786 IPPQ9Y573 584 aa17.44■□□□□ 0.38
DDX54-205ENST00000548786 NT5C1B-RDH14C9J2C7 533 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 OFD1O75665 1012 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 EDN1P05305 212 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 PRKCBP05771 671 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 PLA2G4BP0C869 781 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 ITGA4P13612 1032 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 AXLP30530 894 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 KCNQ1P51787 676 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 PEX3P56589 373 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 CAMK1Q14012 370 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 PPP2R5AQ15172 486 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 TMEM119Q4V9L6 283 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 HYIQ5T013 277 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 KCNT2Q6UVM3 1135 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 DAW1Q8N136 415 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 LRRC15Q8TF66 581 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 HLA-CQ95604 372 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 CALML4Q96GE6 196 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 AK8Q96MA6 479 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 ZNF558Q96NG5 402 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 MRPL9Q9BYD2 267 aaKnown RBP17.43■□□□□ 0.38
DDX54-205ENST00000548786 C2orf40Q9H1Z8 148 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 IGFLR1Q9H665 355 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 RSAD1Q9HA92 442 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 TBC1D13Q9NVG8 400 aa17.43■□□□□ 0.38
DDX54-205ENST00000548786 PRMT7Q9NVM4 692 aaPredicted RBP17.43■□□□□ 0.38
DDX54-205ENST00000548786 ZNF623O75123 536 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 POMCP01189 267 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 PLCG1P19174 1290 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 AKAP5P24588 427 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 GTF2F1P35269 517 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX54-205ENST00000548786 LONP1P36776 959 aaKnown RBP17.42■□□□□ 0.38
DDX54-205ENST00000548786 MRPS5P82675 430 aaKnown RBP17.42■□□□□ 0.38
DDX54-205ENST00000548786 PRPF4BQ13523 1007 aaKnown RBP17.42■□□□□ 0.38
DDX54-205ENST00000548786 PCBP1Q15365 356 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX54-205ENST00000548786 C1orf186Q6ZWK4 172 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 USP49Q70CQ1 688 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 URGCPQ8TCY9 931 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 MICAL1Q8TDZ2 1067 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 EPSTI1Q96J88 318 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 LMAN2LQ9H0V9 348 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 ZSCAN16Q9H4T2 348 aaPredicted RBP17.42■□□□□ 0.38
DDX54-205ENST00000548786 FBXO2Q9UK22 296 aaPredicted RBP17.42■□□□□ 0.38
DDX54-205ENST00000548786 CNTNAP2Q9UHC6 1331 aa17.42■□□□□ 0.38
DDX54-205ENST00000548786 BRWD1Q9NSI6 2320 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 B4GALT3O60512 393 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
DDX54-205ENST00000548786 KCNA5P22460 613 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 MLH1P40692 756 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 NPTX2P47972 431 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 SLC12A3P55017 1021 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 BCAR1P56945 870 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 MAPK7Q13164 816 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 DMP1Q13316 513 aaPredicted RBP17.41■□□□□ 0.38
DDX54-205ENST00000548786 PKP1Q13835 747 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 MAPK6Q16659 721 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 NAALADL2Q58DX5 795 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 SLC27A1Q6PCB7 646 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
DDX54-205ENST00000548786 ADGRD2Q7Z7M1 963 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 RBM23Q86U06 439 aaKnown RBP17.41■□□□□ 0.38
DDX54-205ENST00000548786 ZNF280BQ86YH2 543 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
DDX54-205ENST00000548786 CCDC51Q96ER9 411 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 DRC1Q96MC2 740 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 ZFP42Q96MM3 310 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 ASB2Q96Q27 587 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms