RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 KRT40Q6A162 431 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 CNNM4Q6P4Q7 775 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 TAS1R1Q7RTX1 841 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 APBB1IPQ7Z5R6 666 aaPredicted RBP5.91□□□□□ -1.46
CCDC38-206ENST00000548771 MRGPREQ86SM8 312 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 JAZF1Q86VZ6 243 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 DHX37Q8IY37 1157 aaKnown RBP5.91□□□□□ -1.46
CCDC38-206ENST00000548771 AHI1Q8N157 1196 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 PPM1KQ8N3J5 372 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 CDYL2Q8N8U2 506 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
CCDC38-206ENST00000548771 NUMBLQ9Y6R0 609 aa5.91□□□□□ -1.46
CCDC38-206ENST00000548771 LCHNA4D1U4 455 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 GSG1L2A8MUP6 293 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 GOLGA6L6A8MZA4 724 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 NR4A1P22736 598 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 ADCYAP1R1P41586 468 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 LSSP48449 732 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 CCDC178Q5BJE1 867 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 DCAF17Q5H9S7 520 aaPredicted RBP5.9□□□□□ -1.46
CCDC38-206ENST00000548771 ATXN2LQ8WWM7 1075 aaKnown RBP5.9□□□□□ -1.46
CCDC38-206ENST00000548771 ST8SIA2Q92186 375 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 FEZ1Q99689 392 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 PRRX2Q99811 253 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 PDCD2LQ9BRP1 358 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 MS4A5Q9H3V2 200 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 PLAAQ9Y263 795 aa5.9□□□□□ -1.46
CCDC38-206ENST00000548771 A0A1W2PR48 441 aa5.89□□□□□ -1.47
CCDC38-206ENST00000548771 ALDH1A2O94788 518 aa5.89□□□□□ -1.47
CCDC38-206ENST00000548771 IPO13O94829 963 aaKnown RBP5.89□□□□□ -1.47
CCDC38-206ENST00000548771 LSP1P33241 339 aa5.89□□□□□ -1.47
CCDC38-206ENST00000548771 SCNN1BP51168 640 aa5.89□□□□□ -1.47
CCDC38-206ENST00000548771 MRPL49Q13405 166 aaKnown RBP5.89□□□□□ -1.47
CCDC38-206ENST00000548771 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
CCDC38-206ENST00000548771 MSL3Q8N5Y2 521 aaKnown RBP5.89□□□□□ -1.47
CCDC38-206ENST00000548771 GAB3Q8WWW8 586 aa5.89□□□□□ -1.47
CCDC38-206ENST00000548771 LENG9Q96B70 501 aa5.89□□□□□ -1.47
CCDC38-206ENST00000548771 GPR101Q96P66 508 aaPredicted RBP5.89□□□□□ -1.47
CCDC38-206ENST00000548771 COL4A3Q01955 1670 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 A0A087X1B8 175 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 CDC45O75419 566 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 MANFP55145 182 aaKnown RBP5.88□□□□□ -1.47
CCDC38-206ENST00000548771 COL10A1Q03692 680 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 CXorf67Q86X51 503 aaPredicted RBP5.88□□□□□ -1.47
CCDC38-206ENST00000548771 RPUSD2Q8IZ73 545 aaKnown RBP5.88□□□□□ -1.47
CCDC38-206ENST00000548771 ARL8AQ96BM9 186 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 MFSD3Q96ES6 412 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 AGAP2Q99490 1192 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 PRDM12Q9H4Q4 367 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 EMC7Q9NPA0 242 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 NCDNQ9UBB6 729 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 PRSS50Q9UI38 385 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 PPP2R3BQ9Y5P8 575 aa5.88□□□□□ -1.47
CCDC38-206ENST00000548771 NRP1O14786 923 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 FOXN1O15353 648 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 FKBP9O95302 570 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 ZFP36P26651 326 aaKnown RBP5.87□□□□□ -1.47
CCDC38-206ENST00000548771 PTTG1IPP53801 180 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 OCRLQ01968 901 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 FAM214AQ32MH5 1076 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 FRMD7Q6ZUT3 714 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 FKBP9P1Q75LS8 142 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 MRGPRGQ86SM5 289 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 OR52N2Q8NGI0 321 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 RSAD2Q8WXG1 361 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 HAS1Q92839 578 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
CCDC38-206ENST00000548771 WNT8AQ9H1J5 351 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 EVLQ9UI08 416 aaPredicted RBP5.87□□□□□ -1.47
CCDC38-206ENST00000548771 USP18Q9UMW8 372 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 HS3ST4Q9Y661 456 aa5.87□□□□□ -1.47
CCDC38-206ENST00000548771 ENPP3O14638 875 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 FAM20BO75063 409 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 BPIP17213 487 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 PTGS2P35354 604 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 CASRP41180 1078 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 WNT3AP56704 352 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 TRIM25Q14258 630 aaKnown RBP5.86□□□□□ -1.47
CCDC38-206ENST00000548771 CSRP2Q16527 193 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 DOK3Q7L591 496 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 DNAJC10Q8IXB1 793 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 MB21D1Q8N884 522 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 SLC25A43Q8WUT9 341 aaPredicted RBP5.86□□□□□ -1.47
CCDC38-206ENST00000548771 FERMT2Q96AC1 680 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 PGBD4Q96DM1 585 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 CPEB1Q9BZB8 566 aaKnown RBP5.86□□□□□ -1.47
CCDC38-206ENST00000548771 FZD1Q9UP38 647 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
CCDC38-206ENST00000548771 DMRT1Q9Y5R6 373 aa5.86□□□□□ -1.47
CCDC38-206ENST00000548771 RPS6KA4O75676 772 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 GNAT2P19087 354 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 UBE3CQ15386 1083 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 BROXQ5VW32 411 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 RASSF3Q86WH2 238 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 ZNF276Q8N554 614 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 LILRA3Q8N6C8 439 aaPredicted RBP5.85□□□□□ -1.47
CCDC38-206ENST00000548771 OR2W6PQ8NHA6 318 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 NRDE2Q9H7Z3 1164 aa5.85□□□□□ -1.47
CCDC38-206ENST00000548771 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms