RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 INTS2Q9H0H0 1204 aaKnown RBP24.87■■□□□ 1.57
NPAS3-206ENST00000548645 STK38LQ9Y2H1 464 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 TBX3O15119 743 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 GCKP35557 465 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 COILP38432 576 aaPredicted RBP24.86■■□□□ 1.57
NPAS3-206ENST00000548645 GRIK3Q13003 919 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 KIF22Q14807 665 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 NFIL3Q16649 462 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 LONRF1Q17RB8 773 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 NAIF1Q69YI7 327 aaPredicted RBP24.86■■□□□ 1.57
NPAS3-206ENST00000548645 PALB2Q86YC2 1186 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 ARMC2Q8NEN0 867 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 BHMT2Q9H2M3 363 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 CYP1B1Q16678 543 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 PRR16Q569H4 304 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 ASRGL1Q7L266 308 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 ZDHHC14Q8IZN3 488 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 LINC00116Q8NCU8 138 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 AGPAT1Q99943 283 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 TRIM7Q9C029 511 aa24.86■■□□□ 1.57
NPAS3-206ENST00000548645 EIF3DO15371 548 aaKnown RBP eCLIP24.85■■□□□ 1.57
NPAS3-206ENST00000548645 MARCKSL1P49006 195 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 MKRN3Q13064 507 aaKnown RBP24.85■■□□□ 1.57
NPAS3-206ENST00000548645 TCEAL1Q15170 157 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 OTUD6AQ7L8S5 288 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 CKAP2Q8WWK9 683 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 FAM170AA1A519 330 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 TMEM110-MUSTN1A8MSY1 372 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 ATP2A2P16615 1042 aaKnown RBP24.85■■□□□ 1.57
NPAS3-206ENST00000548645 CTTNQ14247 550 aaKnown RBP24.85■■□□□ 1.57
NPAS3-206ENST00000548645 ARHGAP44Q17R89 818 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 ERICH1Q86X53 443 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 FAM163AQ96GL9 167 aaPredicted RBP24.85■■□□□ 1.57
NPAS3-206ENST00000548645 RUSC1Q9BVN2 902 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 LIN7AO14910 233 aaPredicted RBP24.85■■□□□ 1.57
NPAS3-206ENST00000548645 TOM1O60784 492 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 CAPRIN2Q6IMN6 1127 aaKnown RBP24.85■■□□□ 1.57
NPAS3-206ENST00000548645 VSTM1Q6UX27 236 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 SPICE1Q8N0Z3 855 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 FITM2Q8N6M3 262 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 PTPN22Q9Y2R2 807 aa24.85■■□□□ 1.57
NPAS3-206ENST00000548645 C10orf71Q711Q0 1435 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 A8MUI8 341 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 PEX5P50542 639 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 CCNHP51946 323 aaPredicted RBP24.84■■□□□ 1.57
NPAS3-206ENST00000548645 MARCH10Q8NA82 808 aaPredicted RBP24.84■■□□□ 1.57
NPAS3-206ENST00000548645 MORC4Q8TE76 937 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 WNT8AQ9H1J5 351 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 CDC42EP4Q9H3Q1 356 aaKnown RBP24.84■■□□□ 1.57
NPAS3-206ENST00000548645 KCNK9Q9NPC2 374 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 PRKAG3Q9UGI9 489 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 SBF2Q86WG5 1849 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 ANKRD63C9JTQ0 380 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 SKIV2L2P42285 1042 aaKnown RBP24.84■■□□□ 1.57
NPAS3-206ENST00000548645 ARHGAP4P98171 946 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 GABPAQ06546 454 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 CBWD6Q4V339 395 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 CBWD3Q5JTY5 395 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 CBWD5Q5RIA9 395 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 KCTD1Q719H9 257 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 DHX37Q8IY37 1157 aaKnown RBP24.84■■□□□ 1.57
NPAS3-206ENST00000548645 PNMA3Q9UL41 463 aa24.84■■□□□ 1.57
NPAS3-206ENST00000548645 LUC7L3O95232 432 aaKnown RBP24.83■■□□□ 1.57
NPAS3-206ENST00000548645 FTLP02792 175 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-206ENST00000548645 RFX1P22670 979 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 GPC5P78333 572 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 AP3B2Q13367 1082 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 ZNF568Q3ZCX4 644 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 ANKRD42Q8N9B4 389 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 USP40Q9NVE5 1235 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 ADAM22Q9P0K1 906 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 KLHL14Q9P2G3 628 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 RABGAP1Q9Y3P9 1069 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 PCDHA1Q9Y5I3 950 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 TULP1O00294 542 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-206ENST00000548645 SMNDC1O75940 238 aaKnown RBP eCLIP24.83■■□□□ 1.57
NPAS3-206ENST00000548645 PDE6BP35913 854 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 CCNG1P51959 295 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 C15orf52Q6ZUT6 534 aaKnown RBP24.83■■□□□ 1.57
NPAS3-206ENST00000548645 MICAL1Q8TDZ2 1067 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 ANKRD27Q96NW4 1050 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 GPR101Q96P66 508 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-206ENST00000548645 FRMD4BQ9Y2L6 1034 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 WNK3Q9BYP7 1800 aa24.83■■□□□ 1.57
NPAS3-206ENST00000548645 ZMYM2Q9UBW7 1377 aa24.83■■□□□ 1.56
NPAS3-206ENST00000548645 FAM13AO94988 1023 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 EYA4O95677 639 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 COMTP21964 271 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 COL5A3P25940 1745 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-206ENST00000548645 RRP1BQ14684 758 aaKnown RBP24.82■■□□□ 1.56
NPAS3-206ENST00000548645 ANKRD20A2Q5SQ80 823 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 ANKRD20A1Q5TYW2 823 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 ANKRD20A3Q5VUR7 823 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 SLC13A5Q86YT5 568 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-206ENST00000548645 DDX23Q9BUQ8 820 aaKnown RBP24.82■■□□□ 1.56
NPAS3-206ENST00000548645 BCAS3Q9H6U6 928 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 CD209Q9NNX6 404 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 NARFQ9UHQ1 456 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 CORO1CQ9ULV4 474 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-206ENST00000548645 WFS1O76024 890 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms