RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 NUBP1P53384 320 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 PSMC5P62195 406 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 GIT2Q14161 759 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 CCDC149Q6ZUS6 474 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 FRMD5Q7Z6J6 570 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 DAGLBQ8NCG7 672 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 FLCNQ8NFG4 579 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 INO80BQ9C086 356 aaPredicted RBP18.44■□□□□ 0.54
SSH1-208ENST00000548522 MFSD1Q9H3U5 465 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 RSAD1Q9HA92 442 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 MARCH5Q9NX47 278 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 KCNJ14Q9UNX9 436 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 SPDYE4A6NLX3 237 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 F8W810 466 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 C2CD2LO14523 706 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 PI15O43692 258 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 LILRB3O75022 631 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 N4BP1O75113 896 aaKnown RBP18.43■□□□□ 0.54
SSH1-208ENST00000548522 SRGAP2CP0DJJ0 459 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 NPR3P17342 541 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 KLRC2P26717 231 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 NBL1P41271 181 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 SSRP1Q08945 709 aaKnown RBP18.43■□□□□ 0.54
SSH1-208ENST00000548522 LETM2Q2VYF4 491 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 TAS1R1Q7RTX1 841 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 MRPL10Q7Z7H8 261 aaKnown RBP18.43■□□□□ 0.54
SSH1-208ENST00000548522 TRIM22Q8IYM9 498 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 URGCPQ8TCY9 931 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 PRPF31Q8WWY3 499 aaKnown RBP18.43■□□□□ 0.54
SSH1-208ENST00000548522 RSPH1Q8WYR4 309 aa18.43■□□□□ 0.54
SSH1-208ENST00000548522 PRG3Q9Y2Y8 225 aaPredicted RBP18.43■□□□□ 0.54
SSH1-208ENST00000548522 NRP1O14786 923 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 NARSO43776 548 aaKnown RBP18.42■□□□□ 0.54
SSH1-208ENST00000548522 DEXIO95424 95 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 QARSP47897 775 aaKnown RBP18.42■□□□□ 0.54
SSH1-208ENST00000548522 STK3Q13188 491 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 PPP2R5CQ13362 524 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 NONOQ15233 471 aaKnown RBP eCLIP18.42■□□□□ 0.54
SSH1-208ENST00000548522 MOXD1Q6UVY6 613 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 PLCD3Q8N3E9 789 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 SLC7A3Q8WY07 619 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 PGBD4Q96DM1 585 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 CEP170P1Q96L14 293 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 DHX33Q9H6R0 707 aaKnown RBP18.42■□□□□ 0.54
SSH1-208ENST00000548522 KCNMB3Q9NPA1 279 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 MAN1C1Q9NR34 630 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 GJB4Q9NTQ9 266 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 DNAH14Q0VDD8 3507 aa18.42■□□□□ 0.54
SSH1-208ENST00000548522 FAM186AA6NE01 2351 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 ZBTB39O15060 712 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 PSMA5P28066 241 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 LAMTOR4Q0VGL1 99 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 RUFY3Q7L099 469 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 PPFIBP1Q86W92 1011 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 SMG8Q8ND04 991 aaKnown RBP18.41■□□□□ 0.54
SSH1-208ENST00000548522 PSPC1Q8WXF1 523 aaKnown RBP18.41■□□□□ 0.54
SSH1-208ENST00000548522 RSAD2Q8WXG1 361 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 ACSF2Q96CM8 615 aaPredicted RBP18.41■□□□□ 0.54
SSH1-208ENST00000548522 LXNQ9BS40 222 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 EMILIN2Q9BXX0 1053 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 EIF2AQ9BY44 585 aaKnown RBP18.41■□□□□ 0.54
SSH1-208ENST00000548522 RNF39Q9H2S5 420 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 KCNK12Q9HB15 430 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 ZSWIM6Q9HCJ5 1215 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 RGL1Q9NZL6 768 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 HES2Q9Y543 173 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 C2orf16Q68DN1 1984 aa18.41■□□□□ 0.54
SSH1-208ENST00000548522 CPLX1O14810 134 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 CLCN5P51795 746 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 AK2P54819 239 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 TDGQ13569 410 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 EMC2Q15006 297 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 OTOP3Q7RTS5 596 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 KRT25Q7Z3Z0 450 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 SIX5Q8N196 739 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 RNF149Q8NC42 400 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 HAS1Q92839 578 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 B3GALT6Q96L58 329 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 JPH2Q9BR39 696 aaPredicted RBP18.4■□□□□ 0.54
SSH1-208ENST00000548522 TMEM175Q9BSA9 504 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 SLKQ9H2G2 1235 aaPredicted RBP18.4■□□□□ 0.54
SSH1-208ENST00000548522 MRPL17Q9NRX2 175 aaKnown RBP18.4■□□□□ 0.54
SSH1-208ENST00000548522 DUSP12Q9UNI6 340 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 FAN1Q9Y2M0 1017 aa18.4■□□□□ 0.54
SSH1-208ENST00000548522 CARNS1A5YM72 827 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 TEX28O15482 410 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 TSPAN1O60635 241 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 RFPL2O75678 378 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 SOD2P04179 222 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 URODP06132 367 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 AOC1P19801 751 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 MLH1P40692 756 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 SRGAP1Q7Z6B7 1085 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 COLGALT2Q8IYK4 626 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 OXER1Q8TDS5 423 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 CPB2Q96IY4 423 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 ZFP42Q96MM3 310 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 FAM193BQ96PV7 902 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms