RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 MRPS6P82932 125 aaKnown RBP31.55■■■□□ 2.64
BRF1-213ENST00000548421 BICD1Q96G01 975 aa31.55■■■□□ 2.64
BRF1-213ENST00000548421 TRPV6Q9H1D0 765 aa31.55■■■□□ 2.64
BRF1-213ENST00000548421 FZD8Q9H461 694 aa31.55■■■□□ 2.64
BRF1-213ENST00000548421 MINDY3Q9H8M7 445 aa31.55■■■□□ 2.64
BRF1-213ENST00000548421 AGPAT3Q9NRZ7 376 aa31.55■■■□□ 2.64
BRF1-213ENST00000548421 GINS2Q9Y248 185 aa31.55■■■□□ 2.64
BRF1-213ENST00000548421 M0QZ92 97 aa31.54■■■□□ 2.64
BRF1-213ENST00000548421 HNRNPDLO14979 420 aaKnown RBP31.54■■■□□ 2.64
BRF1-213ENST00000548421 FKBP3Q00688 224 aaKnown RBP31.54■■■□□ 2.64
BRF1-213ENST00000548421 NOC3LQ8WTT2 800 aaKnown RBP31.54■■■□□ 2.64
BRF1-213ENST00000548421 OSMRQ99650 979 aa31.54■■■□□ 2.64
BRF1-213ENST00000548421 PRMT7Q9NVM4 692 aaPredicted RBP31.54■■■□□ 2.64
BRF1-213ENST00000548421 MROH7Q68CQ1 1323 aa31.54■■■□□ 2.64
BRF1-213ENST00000548421 FGFR1OPO95684 399 aaKnown RBP31.53■■■□□ 2.64
BRF1-213ENST00000548421 PIGRP01833 764 aa31.53■■■□□ 2.64
BRF1-213ENST00000548421 CRYBB1P53674 252 aaPredicted RBP31.53■■■□□ 2.64
BRF1-213ENST00000548421 NFIL3Q16649 462 aa31.53■■■□□ 2.64
BRF1-213ENST00000548421 UVSSAQ2YD98 709 aa31.53■■■□□ 2.64
BRF1-213ENST00000548421 DIS3LQ8TF46 1054 aaKnown RBP31.53■■■□□ 2.64
BRF1-213ENST00000548421 SRRTQ9BXP5 876 aaKnown RBP31.53■■■□□ 2.64
BRF1-213ENST00000548421 MRPL4Q9BYD3 311 aaKnown RBP31.53■■■□□ 2.64
BRF1-213ENST00000548421 HSD3B7Q9H2F3 369 aa31.53■■■□□ 2.64
BRF1-213ENST00000548421 GRPEL1Q9HAV7 217 aa31.53■■■□□ 2.64
BRF1-213ENST00000548421 ACKR2O00590 384 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 NR3C1P04150 777 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 LIG4P49917 911 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 FAM187BQ17R55 369 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 SLC39A5Q6ZMH5 540 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 FAM126BQ8IXS8 530 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 ZC3H3Q8IXZ2 948 aaKnown RBP31.52■■■□□ 2.64
BRF1-213ENST00000548421 DHX38Q92620 1227 aaKnown RBP31.52■■■□□ 2.64
BRF1-213ENST00000548421 PRIMPOLQ96LW4 560 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 CELF4Q9BZC1 486 aaKnown RBP31.52■■■□□ 2.64
BRF1-213ENST00000548421 THAP9Q9H5L6 903 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 CDHR5Q9HBB8 845 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 SAMSN1Q9NSI8 373 aaKnown RBP31.52■■■□□ 2.64
BRF1-213ENST00000548421 TRPV2Q9Y5S1 764 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 CLIC2O15247 247 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 CAND2O75155 1236 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 DARSP14868 501 aaKnown RBP31.52■■■□□ 2.64
BRF1-213ENST00000548421 NR2F2P24468 414 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 RPL13P26373 211 aaKnown RBP31.52■■■□□ 2.64
BRF1-213ENST00000548421 THPOP40225 353 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 ZPBP2Q6X784 338 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 LRRC55Q6ZSA7 311 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 CDY2AQ9Y6F7 541 aa31.52■■■□□ 2.64
BRF1-213ENST00000548421 EDN1P05305 212 aa31.51■■■□□ 2.63
BRF1-213ENST00000548421 IQCF3P0C7M6 154 aa31.51■■■□□ 2.63
BRF1-213ENST00000548421 ATN1P54259 1190 aaPredicted RBP31.51■■■□□ 2.63
BRF1-213ENST00000548421 PCBP1Q15365 356 aaKnown RBP eCLIP31.51■■■□□ 2.63
BRF1-213ENST00000548421 TRIM71Q2Q1W2 868 aaKnown RBP31.51■■■□□ 2.63
BRF1-213ENST00000548421 CDKAL1Q5VV42 579 aa31.51■■■□□ 2.63
BRF1-213ENST00000548421 C12orf56Q8IXR9 622 aa31.51■■■□□ 2.63
BRF1-213ENST00000548421 TMEM174Q8WUU8 243 aa31.51■■■□□ 2.63
BRF1-213ENST00000548421 CEP63Q96MT8 703 aa31.51■■■□□ 2.63
BRF1-213ENST00000548421 TARS2Q9BW92 718 aaKnown RBP31.51■■■□□ 2.63
BRF1-213ENST00000548421 TISP43B9A030 160 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 ANKRD63C9JTQ0 380 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 CSDE1O75534 798 aaKnown RBP31.5■■■□□ 2.63
BRF1-213ENST00000548421 ZNF18P17022 549 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 EIF4BP23588 611 aaKnown RBP31.5■■■□□ 2.63
BRF1-213ENST00000548421 ADAM9Q13443 819 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 PRPF4BQ13523 1007 aaKnown RBP31.5■■■□□ 2.63
BRF1-213ENST00000548421 SNX17Q15036 470 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 C1orf53Q5VUE5 145 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 SLC39A4Q6P5W5 647 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 C11orf49Q9H6J7 331 aa31.5■■■□□ 2.63
BRF1-213ENST00000548421 CETN3O15182 167 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 CTSHP09668 335 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 MRE11P49959 708 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 MGAT3Q09327 533 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 MYBPC2Q14324 1141 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 AMHR2Q16671 573 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 ARMCX5Q6P1M9 558 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 SLC9A9Q8IVB4 645 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 TNS4Q8IZW8 715 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 EEF2KMTQ96G04 330 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 USP20Q9Y2K6 914 aa31.49■■■□□ 2.63
BRF1-213ENST00000548421 CNTNAP2Q9UHC6 1331 aa31.48■■■□□ 2.63
BRF1-213ENST00000548421 TLR3O15455 904 aaKnown RBP31.48■■■□□ 2.63
BRF1-213ENST00000548421 ERLIN2O94905 339 aa31.48■■■□□ 2.63
BRF1-213ENST00000548421 CD4P01730 458 aa31.48■■■□□ 2.63
BRF1-213ENST00000548421 HSP90AA4PQ58FG1 418 aa31.48■■■□□ 2.63
BRF1-213ENST00000548421 ANKRD33Q7Z3H0 272 aa31.48■■■□□ 2.63
BRF1-213ENST00000548421 FAM114A1Q8IWE2 563 aa31.48■■■□□ 2.63
BRF1-213ENST00000548421 TMEM40Q8WWA1 233 aa31.48■■■□□ 2.63
BRF1-213ENST00000548421 PAWRQ96IZ0 340 aaKnown RBP31.48■■■□□ 2.63
BRF1-213ENST00000548421 ACO2Q99798 780 aaKnown RBP31.48■■■□□ 2.63
BRF1-213ENST00000548421 PQBP1O60828 265 aaKnown RBP31.47■■■□□ 2.63
BRF1-213ENST00000548421 CHRNA1P02708 482 aa31.47■■■□□ 2.63
BRF1-213ENST00000548421 GARTP22102 1010 aa31.47■■■□□ 2.63
BRF1-213ENST00000548421 SFPQP23246 707 aaKnown RBP eCLIP31.47■■■□□ 2.63
BRF1-213ENST00000548421 ADSSP30520 456 aa31.47■■■□□ 2.63
BRF1-213ENST00000548421 SLFN12LQ6IEE8 588 aa31.47■■■□□ 2.63
BRF1-213ENST00000548421 CBWD1Q9BRT8 395 aa31.47■■■□□ 2.63
BRF1-213ENST00000548421 DMAC2Q9NW81 257 aa31.47■■■□□ 2.63
BRF1-213ENST00000548421 STYXL1Q9Y6J8 313 aa31.47■■■□□ 2.63
BRF1-213ENST00000548421 TTLL13PA6NNM8 815 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 B4GALT5O43286 388 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms