RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 A0A087WWV3 80 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 NT5C1B-RDH14C9J2C7 533 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 SLITRK3O94933 977 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 EOMESO95936 686 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ALADP13716 330 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 SFPQP23246 707 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 YWHABP31946 246 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 CA8P35219 290 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 RFC5P40937 340 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 TXKP42681 527 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 PHKA2P46019 1235 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ALDH7A1P49419 539 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 COPS2P61201 443 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 PLCB3Q01970 1234 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 GUCY1B3Q02153 619 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ZP2Q05996 745 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 LAMTOR4Q0VGL1 99 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 SMAD4Q13485 552 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 SMAD2Q15796 467 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 PLPP4Q5VZY2 271 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 LLGL2Q6P1M3 1020 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 Q6ZNB5 142 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ZNF598Q86UK7 904 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ZNF410Q86VK4 478 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ADHFE1Q8IWW8 467 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 C4orf19Q8IY42 314 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 DIS3L2Q8IYB7 885 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 EXOC8Q8IYI6 725 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 LRRC43Q8N309 656 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 PSPC1Q8WXF1 523 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 MRPS27Q92552 414 aaKnown RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 TNFRSF25Q93038 417 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 LXNQ9BS40 222 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 APOL5Q9BWW9 433 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ZSWIM4Q9H7M6 989 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 TTC12Q9H892 705 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-211ENST00000547950 ENTPD7Q9NQZ7 604 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 PRKAG3Q9UGI9 489 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 INPP5FQ9Y2H2 1132 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 COL4A3BPQ9Y5P4 624 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 COL4A6Q14031 1691 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 MEIS3P2A8K0S8 358 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 HIDE1A8MVS5 230 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 ASAP2O43150 1006 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 GPR37L1O60883 481 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 ZC3H11AO75152 810 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 CXCL14O95715 111 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 GLP2RO95838 553 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 SKIP12755 728 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 ATF7P17544 494 aaPredicted RBP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 BCAR1P56945 870 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 RNASELQ05823 741 aaKnown RBP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 SAFBQ15424 915 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 CALCRLQ16602 461 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 DUSP6Q16828 381 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 GLB1LQ6UWU2 654 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 RNF149Q8NC42 400 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 VN1R2Q8NFZ6 395 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 PGBD4Q96DM1 585 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 MSLNLQ96KJ4 702 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 HSD17B14Q9BPX1 270 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 EIF2AK1Q9BQI3 630 aaKnown RBP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 GBP3Q9H0R5 595 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 DHX33Q9H6R0 707 aaKnown RBP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 MINDY3Q9H8M7 445 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 IFT122Q9HBG6 1241 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 NGRNQ9NPE2 291 aaKnown RBP7.48□□□□□ -1.21
SCAF11-211ENST00000547950 C11orf16Q9NQ32 467 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 FAM105AQ9NUU6 356 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 LIMCH1Q9UPQ0 1083 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 LZTS1Q9Y250 596 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 PCDHB2Q9Y5E7 798 aa7.48□□□□□ -1.21
SCAF11-211ENST00000547950 WNT7AO00755 349 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 FSCN2O14926 492 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 DCXO43602 365 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 NEMFO60524 1076 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 ZNF623O75123 536 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 OFD1O75665 1012 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 EYA4O95677 639 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 CENPBP07199 599 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 MCM7P33993 719 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 PPM1AP35813 382 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 TECP42680 631 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 SPIRE1Q08AE8 756 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 NCBP1Q09161 790 aaKnown RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 COASYQ13057 564 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 EMC2Q15006 297 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 ZNF174Q15697 407 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 NOMO2Q5JPE7 1267 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 MAEAQ7L5Y9 396 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 SRGAP1Q7Z6B7 1085 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 FERMT3Q86UX7 667 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 RNF135Q8IUD6 432 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 CCDC83Q8IWF9 413 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 SLC39A11Q8N1S5 342 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 MRPL43Q8N983 215 aaKnown RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 TMEM87AQ8NBN3 555 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 PIGOQ8TEQ8 1089 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms