RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 R3HCC1Q9Y3T6 440 aaKnown RBP14.64□□□□□ -0.07
PTCH1-215ENST00000547672 STYXL1Q9Y6J8 313 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 DOCK5Q9H7D0 1870 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 RNF225M0QZC1 329 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-215ENST00000547672 IGF2BP3O00425 579 aaKnown RBP eCLIP14.63□□□□□ -0.07
PTCH1-215ENST00000547672 CA12O43570 354 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 EXTL3O43909 919 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 AKR1B10O60218 316 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 GFPT2O94808 682 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 GLRA2P23416 452 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 MYL7Q01449 175 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 TNFAIP2Q03169 654 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-215ENST00000547672 SURF1Q15526 300 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 SNRNP35Q16560 246 aaKnown RBP14.63□□□□□ -0.07
PTCH1-215ENST00000547672 RAD9BQ6WBX8 426 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 TOGARAM2Q6ZUX3 1019 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 KIAA1328Q86T90 577 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 PRPF31Q8WWY3 499 aaKnown RBP14.63□□□□□ -0.07
PTCH1-215ENST00000547672 FBXL18Q96ME1 805 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 CRACR2AQ9BSW2 395 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 MRPL4Q9BYD3 311 aaKnown RBP14.63□□□□□ -0.07
PTCH1-215ENST00000547672 PCIF1Q9H4Z3 704 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 GCNT4Q9P109 453 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 USP20Q9Y2K6 914 aa14.63□□□□□ -0.07
PTCH1-215ENST00000547672 USP27XA6NNY8 438 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 KPNA6O60684 536 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 LGALS2P05162 132 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 HOXD8P13378 290 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-215ENST00000547672 UCHL3P15374 230 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 FERP16591 822 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 CASQ1P31415 396 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 STAT1P42224 750 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 KLK7P49862 253 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 AP3M2P53677 418 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 ASIC2Q16515 512 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 MAPK6Q16659 721 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 KYAT1Q16773 422 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 WDR59Q6PJI9 974 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 RDH13Q8NBN7 331 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 OR6J1Q8NGC5 347 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 BSNDQ8WZ55 320 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 BAP1Q92560 729 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 ZNF592Q92610 1267 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 MFSD14AQ96MC6 490 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 NFKBIZQ9BYH8 718 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 STK33Q9BYT3 514 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 KATNBL1Q9H079 304 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 SUGCTQ9HAC7 445 aa14.62□□□□□ -0.07
PTCH1-215ENST00000547672 SUCLA2Q9P2R7 463 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-215ENST00000547672 ZHX1Q9UKY1 873 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-215ENST00000547672 LRRC53A6NM62 1247 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 H3BRB1 525 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 TNPO2O14787 897 aaKnown RBP14.61□□□□□ -0.07
PTCH1-215ENST00000547672 NOL4O94818 638 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 MARK3P27448 753 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 ADCYAP1R1P41586 468 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 PHKA2P46019 1235 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 FCGRTP55899 365 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 GNG11P61952 73 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 KLHL30Q0D2K2 578 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 LAMTOR4Q0VGL1 99 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 KIF5AQ12840 1032 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 NOGQ13253 232 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 KRT39Q6A163 491 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 EFCAB12Q6NXP0 572 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 APBB1IPQ7Z5R6 666 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-215ENST00000547672 ASAP3Q8TDY4 903 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 AFG1LQ8WV93 481 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 FNBP1Q96RU3 617 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 CHP1Q99653 195 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 APBA2Q99767 749 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 CBWD1Q9BRT8 395 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 GANQ9H2C0 597 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 TUT1Q9H6E5 874 aaKnown RBP14.61□□□□□ -0.07
PTCH1-215ENST00000547672 NLRC4Q9NPP4 1024 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 AGO2Q9UKV8 859 aaKnown RBP14.61□□□□□ -0.07
PTCH1-215ENST00000547672 TELO2Q9Y4R8 837 aa14.61□□□□□ -0.07
PTCH1-215ENST00000547672 ANKRD63C9JTQ0 380 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 CLDN3O15551 220 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 ZC3H11AO75152 810 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTCH1-215ENST00000547672 LCA5LO95447 670 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 SLC9A1P19634 815 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 MATR3P43243 847 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTCH1-215ENST00000547672 CPT1AP50416 773 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 TUBB4BP68371 445 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 POU5F1Q01860 360 aaKnown RBP14.6□□□□□ -0.07
PTCH1-215ENST00000547672 NCBP1Q09161 790 aaKnown RBP14.6□□□□□ -0.07
PTCH1-215ENST00000547672 KIF22Q14807 665 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 CDCA2Q69YH5 1023 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-215ENST00000547672 TRIM65Q6PJ69 517 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 ENOSF1Q7L5Y1 443 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 NPLOC4Q8TAT6 608 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 PARD3BQ8TEW8 1205 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 USP6NLQ92738 828 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 COPS5Q92905 334 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 MAP7D2Q96T17 732 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 INTS2Q9H0H0 1204 aaKnown RBP14.6□□□□□ -0.07
PTCH1-215ENST00000547672 TMEM8AQ9HCN3 771 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms