RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FZD8Q9H461 694 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 C11orf49Q9H6J7 331 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 TRMT13Q9NUP7 481 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 TRPV2Q9Y5S1 764 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 DCDC2CA8MYV0 355 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 ACKR2O00590 384 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 KIAA0391O15091 583 aaKnown RBP17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 B4GALT4O60513 344 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 ERLIN2O94905 339 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 DARSP14868 501 aaKnown RBP17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 SFPQP23246 707 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 EIF4BP23588 611 aaKnown RBP17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 HOXD13P35453 343 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 THPOP40225 353 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 LIG4P49917 911 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 MBTD1Q05BQ5 628 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 KCNA1Q09470 495 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 BFSP2Q13515 415 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 SNX17Q15036 470 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 UVSSAQ2YD98 709 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 SLFN12LQ6IEE8 588 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 ANKRD33Q7Z3H0 272 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 NECAB2Q7Z6G3 386 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 FAM114A1Q8IWE2 563 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 FAM126BQ8IXS8 530 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 RNF214Q8ND24 703 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 TMEM174Q8WUU8 243 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 CEP63Q96MT8 703 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 CTAGE1Q96RT6 745 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 RBSNQ9H1K0 784 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 NFE2L3Q9Y4A8 694 aa17.36■□□□□ 0.37
TRAFD1-203ENST00000547063 CETN3O15182 167 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 TGFB1I1O43294 461 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 RBL2Q08999 1139 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 TMEM62Q0P6H9 643 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 PRPF4BQ13523 1007 aaKnown RBP17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 TAS1R3Q7RTX0 852 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 APBB1IPQ7Z5R6 666 aaPredicted RBP17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 SLC9A9Q8IVB4 645 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 C12orf56Q8IXR9 622 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 PPP1R16BQ96T49 567 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 THAP9Q9H5L6 903 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 AGPAT3Q9NRZ7 376 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 GINS2Q9Y248 185 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 SQORQ9Y6N5 450 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 ZMYM2Q9UBW7 1377 aa17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 KIAA0100Q14667 2235 aaKnown RBP17.35■□□□□ 0.37
TRAFD1-203ENST00000547063 TRIM49BA6NDI0 452 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 GNA14O95837 355 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 CD4P01730 458 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 GARTP22102 1010 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 AXLP30530 894 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 PMS1P54277 932 aaKnown RBP17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 SPAG1Q07617 926 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 ADAM9Q13443 819 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 TMEM132AQ24JP5 1023 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 FAM26DQ5JW98 314 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 ARMCX5Q6P1M9 558 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 FAM43BQ6ZT52 329 aaPredicted RBP17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 USP38Q8NB14 1042 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 ANKRD20A12PQ8NF67 263 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 PAWRQ96IZ0 340 aaKnown RBP17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 ZNF668Q96K58 619 aaPredicted RBP17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 OSMRQ99650 979 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 DUSP9Q99956 384 aaKnown RBP17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 CDY2AQ9Y6F7 541 aa17.34■□□□□ 0.37
TRAFD1-203ENST00000547063 CNTNAP2Q9UHC6 1331 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 PQBP1O60828 265 aaKnown RBP17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 TOM1L1O75674 476 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 NR3C1P04150 777 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 NR2F2P24468 414 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 NCAPHQ15003 741 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 TRIM71Q2Q1W2 868 aaKnown RBP17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 CATSPER4Q7RTX7 472 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 DIS3LQ8TF46 1054 aaKnown RBP17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 MED15Q96RN5 788 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 SRRTQ9BXP5 876 aaKnown RBP17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 MINDY3Q9H8M7 445 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 FANCLQ9NW38 375 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 MAGEC2Q9UBF1 373 aaPredicted RBP17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 STYXL1Q9Y6J8 313 aa17.33■□□□□ 0.36
TRAFD1-203ENST00000547063 FSD2A1L4K1 749 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 LDHAP00338 332 aaKnown RBP17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 CKBP12277 381 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 CDK11BP21127 795 aaKnown RBP17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 TSHZ1Q6ZSZ6 1077 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 FILIP1Q7Z7B0 1213 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 ZC3H3Q8IXZ2 948 aaKnown RBP17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 POMGNT1Q8WZA1 660 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 DHX38Q92620 1227 aaKnown RBP17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 ACO2Q99798 780 aaKnown RBP17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 MKNK1Q9BUB5 465 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 TARS2Q9BW92 718 aaKnown RBP17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 KIAA1586Q9HCI6 787 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 TNFSF13BQ9Y275 285 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms