RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 CXCL14O95715 111 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 PLA2G5P39877 138 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 RARRES1P49788 294 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 TFDP1Q14186 410 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 LLGL2Q6P1M3 1020 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 SYCE2Q6PIF2 218 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 DDX53Q86TM3 631 aaKnown RBP16.01■□□□□ 0.15
COL2A1-209ENST00000546974 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 CASP10Q92851 521 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 FAM122AQ96E09 287 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 IGSF21Q96ID5 467 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 ZBP1Q9H171 429 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 TMEM60Q9H2L4 133 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 RSAD1Q9HA92 442 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 KANSL3Q9P2N6 904 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 MUTYHQ9UIF7 546 aa16.01■□□□□ 0.15
COL2A1-209ENST00000546974 WDFY4Q6ZS81 3184 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 ERLIN2O94905 339 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
COL2A1-209ENST00000546974 ARL2P36404 184 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 GUCY1B3Q02153 619 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
COL2A1-209ENST00000546974 GIT2Q14161 759 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 TMEM173Q86WV6 379 aaPredicted RBP16■□□□□ 0.15
COL2A1-209ENST00000546974 VPS52Q8N1B4 723 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 CCDC51Q96ER9 411 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 C8orf76Q96K31 380 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 ZSCAN31Q96LW9 406 aaPredicted RBP16■□□□□ 0.15
COL2A1-209ENST00000546974 CCDC43Q96MW1 224 aaKnown RBP16■□□□□ 0.15
COL2A1-209ENST00000546974 NFKBIZQ9BYH8 718 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 STK39Q9UEW8 545 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 HCFC2Q9Y5Z7 792 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 IRAK3Q9Y616 596 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 TECTAO75443 2155 aa16■□□□□ 0.15
COL2A1-209ENST00000546974 POTEMA6NI47 508 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 TSPAN1O60635 241 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 CLASP2O75122 1294 aaKnown RBP15.99■□□□□ 0.15
COL2A1-209ENST00000546974 CTSAP10619 480 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 MCM7P33993 719 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 SLC11A1P49279 550 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 HMGN5P82970 282 aaKnown RBP15.99■□□□□ 0.15
COL2A1-209ENST00000546974 ORC2Q13416 577 aaPredicted RBP15.99■□□□□ 0.15
COL2A1-209ENST00000546974 TPRNQ4KMQ1 711 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 NOTUMQ6P988 496 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 ZNF280BQ86YH2 543 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 SMG8Q8ND04 991 aaKnown RBP15.99■□□□□ 0.15
COL2A1-209ENST00000546974 ASAP3Q8TDY4 903 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 PIGOQ8TEQ8 1089 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 TMEM175Q9BSA9 504 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 GBP3Q9H0R5 595 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 FOXP1Q9H334 677 aaPredicted RBP15.99■□□□□ 0.15
COL2A1-209ENST00000546974 TUFT1Q9NNX1 390 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 SH2B1Q9NRF2 756 aaPredicted RBP15.99■□□□□ 0.15
COL2A1-209ENST00000546974 DNAJB4Q9UDY4 337 aa15.99■□□□□ 0.15
COL2A1-209ENST00000546974 TDRD15B5MCY1 1934 aaKnown RBP15.98■□□□□ 0.15
COL2A1-209ENST00000546974 INO80B-WBP1J3KQ70 363 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 DDHD2O94830 711 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 ALDH2P05091 517 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
COL2A1-209ENST00000546974 SPATA31C1P0DKV0 1188 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 ITGA4P13612 1032 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 ATP2B1P20020 1258 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 GLRA2P23416 452 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 CA8P35219 290 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 AFF1P51825 1210 aaKnown RBP15.98■□□□□ 0.15
COL2A1-209ENST00000546974 MBTD1Q05BQ5 628 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 CAPSQ13938 189 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 FBXO18Q8NFZ0 1043 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 BCL7CQ8WUZ0 217 aaPredicted RBP15.98■□□□□ 0.15
COL2A1-209ENST00000546974 EDAQ92838 391 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 RPGRIP1Q96KN7 1286 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 FAM193BQ96PV7 902 aaPredicted RBP15.98■□□□□ 0.15
COL2A1-209ENST00000546974 POLR3CQ9BUI4 534 aaPredicted RBP15.98■□□□□ 0.15
COL2A1-209ENST00000546974 CSRNP2Q9H175 543 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 FAN1Q9Y2M0 1017 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 IPPQ9Y573 584 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 MYO10Q9HD67 2058 aa15.98■□□□□ 0.15
COL2A1-209ENST00000546974 MUC6Q6W4X9 2439 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.97■□□□□ 0.15
COL2A1-209ENST00000546974 INPPL1O15357 1258 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 B4GALT3O60512 393 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 POMCP01189 267 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 ITIH3Q06033 890 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 AMHR2Q16671 573 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 CATSPER3Q86XQ3 398 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 TMEM87AQ8NBN3 555 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 AUTS2Q8WXX7 1259 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 CPB2Q96IY4 423 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 NACC1Q96RE7 527 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 KIF2CQ99661 725 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 EIF2AQ9BY44 585 aaKnown RBP15.97■□□□□ 0.15
COL2A1-209ENST00000546974 DBR1Q9UK59 544 aaKnown RBP15.97■□□□□ 0.15
COL2A1-209ENST00000546974 ZNF318Q5VUA4 2279 aa15.97■□□□□ 0.15
COL2A1-209ENST00000546974 A0A087WWV3 80 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 NRP1O14786 923 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 USO1O60763 962 aaKnown RBP15.96■□□□□ 0.15
COL2A1-209ENST00000546974 MED24O75448 989 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 OR52Z1P0C646 297 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms